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Biotechnology and Molecular Biology

Quiz yourself by thinking what should be in each of the black spaces below before clicking on it to display the answer.
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Question
Answer
Genetics is considered what kind of science?   show
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Genetic engineering is what kind of science?   show
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DNA unwinding   show
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Restriction endonucleases   show
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show Used in labs to cleave the strand at desired sites  
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Palindromes   show
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show named by combining first letter of bacterial genus, first two letters of the species, and endonuclease number. EcoRI is the first endonuclease in E. coli and HindIII is the third nuclease in Haemophilus influenzae  
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show the short tails of severed DNA  
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Restriction fragments   show
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restriction fragment length polymorphisms (RFLPS)   show
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Ligase   show
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show enzyme; converts RNA into DNA  
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show can be made from mRNA, tRNA, rRNA, et al. Provides valuable means of synthesizing eukaryotic genes from mRNA transcripts.  
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show produces readable pattern of DNA fragments; sample placed in soft agar gel, subjected to electric current; DNA phosphate grps give molecule neg charge, causes DNA to move toward pos pole in gel; Rate of movement depends on size of fragments (large = slow)  
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Hybridize   show
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show oligonucleotide tracers; short stretch of DNA of a known sequence that will base-pair w/ stretch of DNA w/ complementary sequence; detects specific sequences in unknown samples; Reactions revealed by placing photographic film in contact w/ test reaction.  
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show technique that separates fragments of DNA using electrophoresis and identifies them by hybridization  
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show fluorescent in situ hybridization; probes applied to intact cells and observed microscopically for the presence and location of specific genetic marker sequences on genes; effective way to locate genes on chromosomes  
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show DNA sequencing, sanger method, polymerase chain reaction (PCR) DNA sequencing  
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Sanger method   show
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Polymerase chain reaction   show
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Primers   show
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DNA polymerases   show
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Steps in PCR cycle   show
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show DNAs formed in first cycle become amplicons upon denaturization; heating target DNA to 94 degrees C to separate it into two strands; then system is cooled to between 50 and 65 depending on nucleotide sequence  
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show primers added in a concentration that favors binding to the complementary strand of test DNA; reaction prepares the two DNA strands now called amplicons for synthesis.  
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show DNA polymerase and raw materials in the form of nucelotides are added  
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show to deliberately remove genetic material from one organism and combine it with that of a different organism.  
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Cloning   show
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Clones   show
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show receiver of propagated gene from another organism; usually a plasmid or virus; it will insert the DNA into the cloning host.  
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show usually a bacterium or yeast that can replicate the gene and translate it into the protein product for which it codes.  
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Technical aspects of recombinant DNA and gene cloning   show
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Characteristics of cloning vectors   show
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Charon phage   show
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show Human growth hormone, Insulin, Clotting factor VIII  
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show Recombinant organisms produced through introduction of foreign genes are called transgenic or genetically modified organisms (GMOs).  
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show Modified bacteria and viruses  
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Gene therapy   show
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show normal gene is cloned in vectors (retroviruses or adenoviruses). Tissues from patient are incubated w/ these viruses to transfect them with the normal gene. The transfected cells are then reintroduced into the patient’s body by transfusion.  
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show therapy skips the intermediate step of incubation; instead, naked DNA or a virus vector is directly introduced into the patient’s tissues.  
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show treatment prevents transcription or translation of a gene that is unwanted.  
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show Targeting mRNA; when binds to its particular mRNA the double-stranded RNA is inaccessible to the ribosome, resulting in loss of translation of that mRNA; the reading of that mRNA transcript on ribosomes will be blocked and the gene product will not be syn  
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show A unique picture of a genome  
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What is a restriction enzyme?   show
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What evolutionary advantage does a restriction enzyme confer on the bacterium that makes it?   show
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show A clone is an animal that is genetically the same as its parent. It shows no recombination and no variation.  
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show DNA to be sequenced cut into large number of short fragments and separated; test strands denatured to expose single strands to act as templates for complementary strands; fragments divided into 4 separate tubes w/ fluorescent/radioactive primers indicatin  
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show The exact way nucleotides are combined is unique for each organism; DNA fingerprinting emphasizes these differences and arrays the genome in a pattern for comparison. It can be used for medical diagnosis, genetic ancestry information, and forensics.  
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What is a limitation of DNA fingerprinting?   show
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When DNA is used as a probe what rules define what the probe will bind to? What factors affect this binding?   show
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show Short Tandem Repeats found in noncoding portions of genome; they do not have protein functionality.  
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How are STRs used in criminal investigations? Dose STR analysis have the same limitations as DNA fingerprinting?   show
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show A recombinant organism is produced through the introduction of foreign genes that have been inserted into their genome purposefully. They could also be called transgenic or genetically modified.  
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Describe a useful medical product made by recombinant DNA technology.   show
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When was the last time you cloned something? What was it? Why was it a clone?   show
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