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Lesson 17
Nitrogen Metabolism 4
Term | Definition |
---|---|
Why is ammonia toxic to humans? | -NH3 can cross membranes and affect H+ gradient -depletes a-ketoglutarate, affecting citric acid cycle |
Glutamine synthetase | makes glutamine from glutamate, main way to trap NH3, used in many further reactions to add nitrogen |
How is ammonia often moved throughout the body? | In the form of glutamine, urea, alanine, and glutamate |
Role of ATP in glutamine synthetase | adds phosphate to the O- of glutamate, which is a good leaving group. Allows NH3 to be added. Also deprotonates NH4+ |
Carbamoyl-Phosphate Synthase I reaction | HCO3- + 2ATP + NH3 --> Carbamoyl phosphate in two step reaction |
Benefit of using glutamine as an ammonia source | NH3 can be taken from glutamine and used in a reaction without touching water, meaning NH4+ cannot be generated |
Carbamoyl-Phosphate Synthase II reaction | Hydrolyzes glutamine and sends the NH3 through a tunnel to be used to make carbamoyl phosphate - prevents protonation |
Parts of carbamoyl phosphate synthase II | Amidohydrolase site (uses -SH to hydrolyze glutamine); NH3 tunnel (moves NH3 to prevent protonation); biosynthetic site (nucelophilic reaction occurs using NH3) |
Ways that nitrogen is lost from body | Ammonia, uric acid, urea, creatinine |
Fish are? | ammonotelic (excrete ammonia) |
Birds are? | Uricotelic (excrete uric acid) |
Mammals are? | ureotelic (excrete urea) [mainly - some uric acid and creatinine] |
Main site of NH3 detoxification | Liver, some in kidneys |
Urea overall reaction | HCO3- + NH4+ + 3ATP + Aspartate + H2O --> Urea + 5H+ + Fumarate + AMP + PPi + 2ATP + 2Pi |
added benefit of urea reaction | releases H+, can control pH |
Urea Cycle Reactions in mitochondria | Ornithine transcarbamoylase (ornithine --> citrulline), Carbamoyl-Phosphate Synthase I, Glutamine Dehydrogenase for nitrogen |
Urea Cycle reactions in cytoplasm | Argininosuccinate Lyase, Arginiosuccinate Synthase, Arginase |