Unit 1 Protein
Quiz yourself by thinking what should be in
each of the black spaces below before clicking
on it to display the answer.
Help!
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What is the proteome | entire set of proteins expressed by a genome.
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Why is the proteome larger than the genome | alternative RNA splicing and post translational
modification create different proteins from 1 gene
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What is a protein polymer made up of | particular sequence of amino acids
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Why is the order of AA important | This determines protein structure and function
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What is the primary structure of proteins | specific order of AA
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What is the secondary structure of proteins | Hydrogen bonding (along the backbone of the protein strand)
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Name the 3 types of protein secondary structure | alpha helix
beta pleated sheet (parallel or anti parallel)
turns
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What are the 4 groups that surround a central carbon on any amino acid | COOH (acid)
NH2 (base)
H
R group (this varies)
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What are the four types of AA | acidic
basic
polar
non polar/hydrophobic
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What functional group denotes an acid | COOH/COO-
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What functional group denotes a base | NH2/NH3+
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What functional group is polar | OH
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What AA are hydrophilic | polar, acidic and basic
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What charge is on an ionised acidic AA | negative i.e. COO-
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What charge is on an ionised basic AA | positive i.e. NH3+
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Tertiary structure of a protein involves between what parts of a AA | R groups
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Name 3 types of interactions that occur at the tertiary/quatenary level | van der waal
ionic
disulphide bridge
hydrogen
hydrophobic
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What type of interaction is covalent at tertiary or quaternary level | disulphide bridge
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What is a prosthethic group | non protein unit tightly bound to a protein necessary for
its function
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Give an example of a prosthetic group | Fe in haemoglobin for oxygen delivery
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What is the different between tertiary and quaternary level of protein structure | tertiary R groups within one polypeptide whereas quaternary interactions involve interactions between R groups on different polypeptide chains
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