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EBIO Exam 1
Vocabulary words from lectures 1-9
| Question | Answer |
|---|---|
| Biological evolution | change in the genetic properties of groups of organisms (“populations”) over the course of generations Often referred to more simply as ‘descent with modification’ or ‘genetic change over time’ |
| Natural selection | ONE mechanism which evolution occurs, but natural selection and evolution are NOT one and the same thing. |
| Five misconceptions of biological evolution: | 1: Evolution and natural selection are the same thing 2: Individual organisms undergo biological evolution 3: Evidence for evolution is only a theory 4: Evolution cannot explain the origin of new species 5: Evolution has been proved |
| essential ism | Concept of eidos ‘form’ or ‘idea’ or ‘essence’ e.g. horses have an immutable (unchangeable) essence, but each individual has its imperfections This was the belief before Darwin |
| Two of Darwins theories from the "origin of Species" | 1.Descent with modification (evolution) 2.Causal agent of evolutionary change (natural selection) |
| Evolutionary theories after Darwin | mutationist theories -argued that discretely different organisms arose via mutation and that natural selection was not required for the origin of new species. Mutation seen as an alternative to natural selection |
| Biological species concept (BSC): | by Mayr: species are groups which are reproductively isolated (do not exchange genes) from other groups |
| Theory of geographic (allopatric) speciation: | Mayr: new species form when populations become geographically isolated, and thus can undergo genetic divergence |
| Theory of founder effect speciation: | Mayr:drastic reductions in population size promote speciation (e.g. via ‘reorganizing’ the genome) |
| genotype | the set of genes in an individual’s DNA |
| genetic drift | Genes mutate at a low rate, typically too low a rate to cause a population to shift from one genotype to another; thus shifts occur instead by random fluctuations |
| reproductive isolation | Species are characterized by barriers to genetic exchange and interbreeding |
| phylogeny | tree of life |
| Fundamental principles of evolution | 1. pheno vs. geno & pheno + geno 2. heredity based on... 3. evolution is populational 4. random and nonrandom changes 5. slight selection can = 6. mutations can accumulate 7. dif. among species are adaptive 8. geographic isolation does what? 9. si |
| tree topology | tree branching order, pattern + branch lengths of tree |
| homologous traits | reflect shared ancestry |
| Homology | possession by two or more groups (e.g. species) of a character state derived from their common ancestor (‘unique origin’) |
| Maximum parsimony | Minimize change-fewest changes = most simularities |
| Homoplasy | possession by two or more groups (e.g. species) of a similar or identical character state that has not (not! not! not!) been derived by all the members of the group from their common ancestor (‘independent origin’) |
| monophyletic group | grouping that includes all descendents of the most recent common ancestor |
| polyphyletic group | in which members are derived from different ancestors. |
| paraphyletic group | one that includes some, but not all, descendents from their most recent common ancestor. |
| sister group | 2 clades or lineages sharing a most recent common ancestor. |
| Character mapping | reconstruction of the history of evolutionary change in interesting characters by inferring character states of ancestors on a phylogeny. |
| characters | a feature or trait (e.g. color of snail shell) |
| 4 common patterns of evolutionary change | 1) Most features modified from pre-existing features 2) Homoplasy is common, change in form associated with change in function 3) Rates of character evolution differ 4) Evolution is often gradual |
| Conservative characters | physical traits that are retained with little or no change over long periods of time |
| mosaic evolution | principle says that a species evolves not as a whole, but piecemeal, with different characters evolving quasi-independently. |
| adaptive radiation | the evolution of ecological and phenotypic diversity within a rapidly evolving lineage. Trees don't look like they go in order |
| character states | one of the variant conditions of a character (e.g. brown or yellow shell color, A or T at a nucleotide position) |
| ancestral state | state found in common ancestor. |
| derived state | state that has evolved from the ancestral state. |
| synapomorphy | a shared derived character state |
| The ‘molecular clock’ | the concept of a steady rate of change of DNA sequences over time, providing a basis for dating the time of divergence of lineages ‘DNA differences build up steadily through time’. |
| Gene flow | the incorporation of genes into the gene pool of one population from one or more other populations |
| hybridization | – interbreeding between species (‘gene flow’ between species) |
| stasis | period of little or no evolutionary change |
| Phyletic gradualism | a traditional model where evolutionary change is gradual and not necessarily associated with speciation |
| speciation | when a new form of species occurs-can be for many reasons |
| punctuated equilibrium | a new species diverges rapidly, but then continues without further change-phenotypic evolution occurs at speciation events only |
| punctuated gradualism | linage evolves in rapid spurts from one equilibrium to another, but speciation does not necessarily occur |
| Hypothesis of ‘ecological opportunity’ | adaptive radiation in phenotypic and species diversity occurs when empty or underutilized ecological niches (habitats) are filled (and it thus follows that diversification requires empty or underutilized niches) |
| nine general patterns 1 | 1) Climates and the distribution of oceans and land masses have changed over time, affecting the geographic distributions of organisms |
| nine general patterns: 2 | 2) The taxonomic composition of the biota has changed continually as new forms originated and others became extinct |
| nine general patterns: 3 | 3At several times, extinction rates have been particularly high (so called mass extinctions) |
| nine general patterns: 4 | 4Especially after mass extinctions, the diversification of higher taxa has sometimes been relatively rapid |
| nine general patterns: 5 | 5The diversification of higher taxa has included increases both in the number of species and in the variety of their form and ecological habitats |
| nine general patterns: 6 | 6) Extinct taxa have sometimes been replaced by unrelated but ecologically similar taxa |
| nine general patterns: 7 | 7Of the variety of forms in a higher taxon that were present in the remote past, usually only a few have persisted in the long term |
| nine general patterns: 8 | 8The geographic distributions of many taxa have changed greatly (continents moved, organisms moved) |
| nine general patterns: 9 | 9Over time, the composition of the biota increasingly resembles that of the present |
| Precambrian times | 1-origin of Eukaryotes 2-photosynthesis evolved 3-evolution of multicellularity division of labor & jack of all trades is a master of none-EVOLVED INDEPENDENTLY 4-organisms were anaerobic |
| Emergence of life | short RNA-like molecules were early replicators |
| Paleozoic life cambrian explosion | most phyla originated, lots of diversification over short amount of time, Cambrian explosion ended with mass extinction |
| Paleozoic life ordovician to devonian | first terrestrial life, plant spores populate land first-greatly diversified, the earliest known arthopods, then vertebrates, ordovician to devonian |
| Paleozoic life end- permian mass extinction | 96% of all species became extinct, few thousand years, end- permian mass extinction |
| mesozoic life | first dinosaurs first mammals first flowering plants period of triassic, jurassic, and cretaceous great diversification of dinosaurs |
| Cenozoic life | the age of mammals-but with extinction of dinosaurs no real explosion of diversification of mammals, Tertiary (T) |
| Late Cenozoic | Pleistocene speciation and 'recent' ice ages, short time period, could migrate between land masses, climate changed there was a move south, glacial refugia |
| glacial refugia | separated areas where favorable conditions persisted during glacial periods |
| biogeography | the study of the geographic distributions of organisms |
| historical biogeography | using both historical and geological circumstances |
| ecological biogeography | ecological factors operating in present time |
| Wallace’s line | separates islands that exhibit very different fauna, despite their close proximity and climatic similarity – the islands only approached each other recently, and belong to two different realms: Oriental and Australian |
| Endemism | restriction, to one biogeographic realm is common |
| disjunct distributions | their distributions have conspicuous gaps, sometimes between realms |
| extinction | loss of species/populations can leave gaps in the distribution |
| dispersal | movement of individuals, can result in range expansion |
| vicariance | separation of populations of a widespread species by barriers arising from changes in geology, climate or habitat |
| Phylogeography | the description and analysis of the processes that govern the geographic distribution of lineages of genes, especially within species and among very closely-related species Relies on phylogenetic analysis, usually of multiple genes. |
| dispersal ability | cannot or have not gotten to certain areas |
| realized niche | exclusion from certain areas, for example due to competition, predation, or lack of adaptation (e.g. due to gene flow – which limits adaptation and reduces population persistence) =species range |
| fundamental ecological niche | set of environmental conditions in which a species can maintain a stable population size (i.e. the physiological tolerance of the species to environmental conditions) |
| Realized ecological niche | actual niche space occupied by a species = species range The realized niche is smaller than the fundamental niche because species are excluded from certain areas by lack of adaptation, competitors, predators |