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Pharmacology FA26 E1
| Question | Answer |
|---|---|
| What is PK? | Pharmacokinetics, ADME, what the body does to the drug |
| What is PD? | Pharmacodynamics, MOA, what the drug does to the body |
| MOA is | PD |
| ADME is | PK |
| What is the underlying principle for why a drug works? | Receptor theory |
| What is the drug target? | receptors, usually macromolecules like proteins, DNA, and RNA |
| What is a drug bound to a target called? | A drug-receptor complex |
| T or F? Any molecule of functional importance can be a drug receptor. | True |
| T or F? Classical and drug receptors are the same thing. | False. Not all drug receptors are classical receptors |
| Which is a bigger class or molecule? Classical receptors or Drug receptors? | Drug receptors |
| Drug forms bond with a receptor via... | IMF/Intermolecular Forces |
| Covalent bonds are unique because... | they are RARE but they are irreversible |
| What is the common irreversibly binding drug that people often take for pain? | Aspirin |
| Covalent bonds are SUPER strong. Why? | Because the drug and the receptor share electrons |
| Why are non-covalent bonds weaker? | Because the drug and the receptor do not share electrons |
| Hydrophobic means... | Water HATING |
| Hydrophilic means... | Water LOVING |
| What molecules typically clump together in water? | Hydrophobic |
| What is the strongest reversible drug to receptor binding force? | Ionic bonds |
| Why are ionic bonds strong? | because they are the attraction of two opposite charges |
| Hydrophobic bonds are what polarity? | Nonpolar |
| Hydrophilic bonds are what polarity? | Polar |
| Organic solvents are hydro... | phobic |
| Strongest non-covalent interaction? | Ionic bond |
| Medium strength non-covalent interaction? | Hydrogen bond |
| Weakest non-covalent interaction? | Hydrophobic bonds |
| The phosphate backbone of DNA is negatively charged, how does that work?? | Pi stacking forces overpower negative bonds in the phosphate backbone |
| Polar molecules do not like | hydrophobic residues |
| More bonds means | stronger binding affinity |
| Less bonds means | weaker binding affinity |
| T or F? Bonds can form over a long distance. | False. Bonds can only form over a short distance |
| T or F? It is important that a drug fit its receptor structurally. | True |
| If the drug makes it to the receptor, binds, and still doesn't have the strongest bond, why might that be? | The molecule is unable to bind with the receptor because the shape causes miniscule but notable distance, or there are bad matches in terms of charge |
| Another way to say binding affinity is | tightness of bonding |
| Fit is not everything, binding affinity also relies on this to match... | charges, + to - |
| A good drug has what relationship to its receptor? | many IMF bonds, good fit, and non-repulsive electrostatic forces |
| What is Bumetanide? | A diuretic |
| How does Bumetanide work? | The drug sits in the binding pocket of the NKCC receptor and blocks it from transporting K+ |
| What enzyme does aspirin inhibit? | COX-1 |
| What does Aspirin do? (basic function) | It inhibits platelet activation and blood clotting |
| How does the body recover from taking irreversibly binding drugs? | By synthesizing new proteins |
| Why can't platelets make new proteins? | Because they have no nucleus |
| Most drug receptors are | proteins |
| The binding pocket in a protein is full of | amino acid side chains |
| What are the two broad names of reversible bonds? | electrostatic and hydrophobic bonds |
| The little eyelashes in Hong's drawings represent what? | Hydrophobic residues |
| Rings of carbon or long chains of carbon are usually | Hydrophobic |
| Hydrophobic molecules preferentially bind to | Other hydrophobic molecules |
| A normal cell can produce COX-1 to overcome the inhibitory action of aspirin. T or F? | True |
| Platelets can produce proteins T or F? | False |
| Chemotherapeutic drugs are also called | Alkylating agents |
| Where do most alkylating agents bond? | The bases of DNA |
| Why do alkylating agents/chemo drugs work on cancer cells? | The presence of the drug molecule covalently linked to DNA interferes with gene transcription and DNA replication |
| How do you increase the likelyhood of a drug finding its receptor? | Increase drug concentration or the receptor concentration |
| Kd tells us the | Binding affinity for a specific drug-receptor pair, level of drug where at least 50% of receptors are bound |
| High binding affinity correlates to what Kd? | Low Kd |
| Low binding affinity correlates to what Kd? | High Kd |
| What is potency? | The amount of a drug required to produce an effect |
| What is efficacy? | The maximum intensity of a response produced by a drug |
| T or F? Higher potency = better drug. | False. Higher potency does not mean a better drug |
| T of F? Higher efficacy = better drug. | True. Higher efficacy generally does mean a better drug |
| In order for a drug to produce an effect, the drug must do what to a receptor when bound? | Cause a conformational change or block a conformational change |
| T or F? Conformational change is reversible. | True |
| Some drugs bind and turn receptor activity on. These are called: | activators/agonists |
| Some drugs bind and turn receptor activity off. These are called: | inhibitors/antagonists |
| What is it called when a substrate binds to a remote site that is not the active site and induces a conformational change? | Allosteric modulation |
| A competitive antagonist... | Binds and turns off the receptor by blocking binding site |
| A non-competitive antagonist... | Binds at a spot other than the active site and allosterically inhibits receptor function |
| With estrogen, in the presence of an agonist, it takes ____ estrogen to produce the same level of effect | less |
| True or False? Drug developers want Kd small for unintended receptors. | False. They want Kd low for intended receptors necause lower Kd = higher binding affinity |
| True or False? Some drugs can lose selectivity at high concentrations | True, too much drug, too many chances to bind off target |
| A chemical from outside of the body is called a | xenobiotic |
| Your body naturally wants to do this to xenobiotics | make them more water soluble to extrete in the urine |
| Your body changes the characteristics of a chemical substance, this is called | Biotransformation |
| Biotransformation includes two parts, these are: | Phase I and Phase II metabolism |
| In Phase I and II, _________ goes up and _________ goes down | hydrophilicity, lipophilicity (think oil) |
| What group does Phase I metabolism typically add to a molecule? | an oxygen as an OH group |
| Phase II attaches what to drug molecules? | Big functional groups |
| CYP enzymes are most prevalent in what phase of metabolism? | Phase I |
| SULT, UGT enzymes are used in what phase of metabolism? | Phase II |
| What is the most abundant CYP enzyme in the liver that accounts for over 50% of drugs metabolized? | CYP3A4 |
| Dr. Hong's favorite phase II enzyme is | NAT2 |
| T or F? Metabolism can both prolong and limit drug action in the body | True |
| What is it called when metabolism activates a drug? | Prodrug |
| T or F? First pass metabolism only applies to orally administered drugs | True |
| The first pass effect often does what to drug serum levels? | Limits it |
| Why can't you take Tylenol with alcohol? | Because it induces CYP2E1 which is the enzyme that bioactivates Tylenol into a toxic metabolite |
| Give an example of a CYP inducer | Rifampin the TB drug |
| Give an example of a CYP inhibitor | Grapefruit juice |
| How does rifampin induce CYP2C9 enzymes? | CYP2C9 enzyme level increases in the liver, this can lead to an increase in metabolism, therefore less therapeutic effects |
| How does grapefruit juice inhibit CYP3A4 enzymes? | It contains compounds that irreversibly inhibit CYP3A4, this would cause drugs metabolized by CYP3A4 to be high, toxicity |
| Tamoxifen acts as an ______ in the breast and a ______ in the bones | antagonist in breast, agonist in bone |
| Tamoxifen is a SERM. What does SERM mean? | selective estrogen receptor modulators |
| When estrogen binds to an estrogen receptor, it cannot activate gene transcription by itself. It needs what? | a co-activator |
| How does the Tamoxifen ER complex prohibit growth in the breast? | it does not allow for the conformational change that allows a co-factor to bind, so ERS cannot activate downstream target genes |
| Why does Tamoxifen induce bone growth? | There is a bone-specific co-activator called NCOA1 that can still bind after Tamoxifen binds causing growth promoting genes to be turned on |
| What is a drug that someone can take instead of Tamoxifen so that there is no unintended uterine growth in treating breast cancer? | Raloxifene |
| Hypothetically, if you introduced NCOA1's into breast tissue of a woman treated with Tamoxifen, what would happen? | Breast growth would be promoted! |
| If two drugs are metabolized by the same enzyme and had the same binding affinity, which drug wins? | The drug with the higher serum concentration |
| Dominating drugs are often called __________ drugs while the losing drug is called _________ drugs. | Perpetrator vs Victim |
| What happens in competitive inhibition? | One drug binds and inhibits the binding of the other |
| In competitive inhibition, which drug would be higher in the serum? | the drug that loses/can't bind to the receptor/the victim drug |
| What happens in non-competitive inhibition? | A substrate binds to a remote regulatory (allosteric) site that causes a conformational change that alters the main active site |
| What happens in mechanism based inhibition? | the enzyme treats a drug as a substrate and metabolism can create a reactive intermediate that can form a covalent bond with the active site |
| How does the body "recover" from mechanism based inhibition? | synthesis of new enzymes |
| What is PXR (pregnane X)? | it is a xenobiotic sensor (pxr) |
| How does PXR (pregnane X) work? | A ligand activates PXR, it forms a complex with RXR and recruits co-factors and upregulates the production of metabolizing enzymes |
| What is CAR (constitutive androsane receptor)? | It is a xenobiotic sensor (car) |
| Which xenobiotic sensor is most important in environmental toxicology? | AhR, or the aryl hydrocarbon receptor |
| Endogenous means | created in the body |
| If you see EC50, it means what? | Kd, drug concentration at half effect |
| A High EC50 means that you need what drug concentration to have an effect? | High concentration |
| A Low EC50 means that you need what drug concentration to have an effect? | Low concentration |
| Linear scale is distorted, so the best presentation of Kd/Drug concentration curves is | Log scale |
| What shape is a linear scale drug concentration curve? | Hyperbolic |
| What shape is a log scale drug concentration curve? | Sigmoid |
| The dose response curve does what when the drug is an agonist? | Moves left on graph (dose response increase) |
| The dose response curve does what when the drug is an antagonist? | Moves right on graph (dose response decrease) |
| What happens to the drug concentration curve when the receptor is exposed to a competitive antagonist? | It moves right on the graph, but can be reversed by increasing substrate levels (ie, increasing estrogen w/ Tamoxifen) |
| What happens to the drug concentration curve when the receptor is exposed to a non-competitive antagonist? | The maximum effect is reduced and cannot be overcome by increasing the substrate levels |
| A smaller drug is worse for specific binding because... | it has fewer opportunities (moieties) to make unique bonds with the receptor |
| What acts quicker? a G-Protein coupled receptor, or a Steroid hormone receptor? | G-Protein Coupled receptors |
| Some drugs need second messengers to | amplify the signal and allow for crosstalk between signaling pathways |
| Why cascade? | Because no new proteins need to be made |
| What major receptor is inside the cell? | Steroid Hormone Receptors |
| Steroids are slow acting... but | long lasting |
| Why are steroids "long lasting?" | because they promote the growth of new proteins |
| In order for a drug to reach a steroid hormone receptor, it must | be hydrophilic and capable of passing the lipid bilayer |
| What is your body trying to maintain when it degrades drugs? | Homeostasis |
| In drug tolerance, repeated stimulation leads to | decreased maximal effect over time |
| You can be de-stimulated by discontinuing a tolerated drug | yeah, duh, rehab exists for this reason |
| Drug metabolism is defined as | the enzymatic alteration of a drug structure |
| Drug metabolism most often takes place where in the body? | the liver |
| CYP3A4 is the enzyme that | metabolizes 50% of drugs on the market! |
| What are the consequences of drug metabolism? | accelerated renal excretion, increased or decreased therapeutic action and/or toxicity, activation of prodrugs |
| What is pharmacogenomics | how a patient responds to a medication based on their genotype |
| T or F? Poor metabolizers (PMs) for a drug will likely display decreased serum concentrations for that drug. | False |
| T or F? Ultra rapid metabolizers (UMs) for a drug will likely display decreased serum concentrations for that drug. | True |
| T or F? Poor metabolizers (PMs) for a drug will likely display decreased serum concentrations for a prodrug. | True |
| T or F? Ultrarapid metabolizers (UMs) for a drug will likely display decreased serum concentrations for a prodrug. | False |
| What is the primary concern with reduced function of SLCO1B1? | Toxicity affecting adherence |
| Somatic DNA changes are not passed on to a person's offspring and are involved in _________. | cancer |
| Pharmacogenomics can affect what pharmacological processes? | transport, metabolism, drug effect on the patient |
| What is the major site of drug metabolism? | Liver |
| What is the goal of drug metabolism by your body? | To make the drug more water-soluble |
| If you induce/increase an enzyme that metabolizes your drug, what happens to plasma concentration of the original drug? | It would go down |
| What kind of messenger are g-protein coupled receptors? | 2nd messengers |
| What is homeostasis? | The ability to maintain a stable status despite external changes? |
| Continuous activation of a receptor may result in _______ receptor sensitivity due to the development of tolerance | decreased |
| Why does desensitization occur? | Because the body wants to return to the state it was in before the drug |
| What does Tachyphylaxis mean? | very quick |
| In desensitization, what happens when the receptor is stimulated constantly long term? | receptor down regulation therefore decreased receptor gene expression |
| T or F? A signaling cascade that occurs downstream of an active receptor is designed to slow down the signal transmission | False |
| T or F? All drug receptors work through a down stream effector. | False |
| T or F? Drug selectivity depends on drug concentration | True |
| T or F? In general, the smaller the drug, the better its specificity. | False |
| Drug A inhibits CYP3A4 which metabolizes Drub B. How would Drug A affect the plasma concentration of Drug B | It would increase drug B concentration |
| What is the affect of tamoxifen on the uterus? | Growth promotion |
| Drug C induces CYP3A4 which metabolizes Drug D. How would the drug C affect the plasma drug concentration of Drug D? | decrease the concentration of drug D |
| Which nuclear receptor is known to be involved in the induction of drug metabolizing enzymes? | PXR |
| What happens when a drug binds to PXR? | PXR binds with RXR and metabolic enzyme production increases |
| This receptor is the molecular sensor | PXR |
| When PXR is inactive, what happens? | Metabolic enzymes decrease production |
| How does PXR know when to stop and start producing enzymes? | Its a negative feedback loop. no drug no enzyme. lots of drug lots of enzyme |
| This receptor acts as a molecular sensor for environmental toxicants | AhR receptor |
| ABC transporters are always | efflux |
| SLC transporters are | efflux and influx |
| Which transporter uses ATP? Why? | ABC because it requires more energy because always pumping out has potential to go against the concentration gradient |
| How can the microbiome be involved in drug metabolism? | It can affect the ionization of drugs due to pH |
| T or F? Smoking can increase the drug serum concentration of a CYP1A2 drug. | False, smoking decreases drug serum concentration of CYP1A2 drugs |
| T or F? Vaping can increase the drug serum concentration of a CYP1A2 drug. | True. Effect likely because of the flavoring agents |
| If smoking decreases drug serum concentration of CYP1A2 drugs, does this demonstrate increased or decreased metabolism? | Increased |
| If smoking increases drug serum concentration of CYP1A2 drugs, does this demonstrate increased or decreased metabolism? | Decreased |
| In elderly patients, what is the main concern with drug dosing? | That the amount of drug will be too high for failing organs and a lowered overall metabolism |
| Which gender is 75% more likely to have adverse drug reactions? | Women |
| Which gender (in general) metabolizes drugs more quickly? | Men |
| What is a polymorphism? | a genetic variation in greater than 1% of the population |
| What is a mutation? | a genetic variation in less than 1% of the population |
| What is a missense mutation? | a change in an amino acid |
| What is a nonsense mutation? | Codes for a premature stop |
| What is a synonymous mutation? | A change in a nucleotide sequence that does not change the amino acid sequence |
| What is a frameshift mutation? | Any nucleotide insertion or deletion not divisible by three |
| How do you calculate an activity score? | You add allele 1 and allele 2 |
| What is phenoconversion? | When a drug converts a genotypically normal metabolizer into a poor metabolizer |
| The SSRI Paroxetine is an ________ for CYP2D6 | inhibitor |
| What transporter is important for statins? | SLCO1B1 |
| What is the drug that causes stevens johnson syndrome if given to specific patients with specific HLA variants? | Carbamazepine |