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Biol 101

Seven properties of life order, self-reproduction, growth and development, response to environment, energy processing, homeostasis, evolutionary adaption
three parts of cell theory all organisms are made of cells, the cell is the smallest unit of life, all cells come from pre-existing cells
three domains of life Bacteria, Archaea, Eukarya
kingdoms of life bacterial, archaeal, protist, plantae, Fungi, Animalia
Bacteria domain bacterial kingdom, unicellular, Prokaryotic (no nucleus)
Archaea domain Archaeal Kingdoms, unicellular, Prokaryotic
Eukaryotic domain Protista (uni or multicellular), Plante, Fungi, Animalia, (multicellular), Eukaryotic (has nucleus)
levels of biological organization (small to large) molecule, organelle, cell, tissue, organ, organ system, organism, population, community, ecosystem, biosphere (each level is builds from the level below it, complexity increases upward)
Science evidence based way of understanding nature, uses observations and experiments to produce tentative knowledge
hypothesis a testable potential explanation, and falsifiable
scientific theory well-supported explanatory framework backed by large amounts of evidence
structure of controlled experiment control group, experimental group, one variable changed, see effect of the treatment
control group no change (baseline)
experimental group receives treatments
testable can be checked with experiments or observations
falsifiable could be proven wrong
Independent variable what the researcher changes (x axis)
Dependent Variable what the researchers measures/observes (y-axis)
controlled variables factors kept the same
living organisms are made up of what? matter
matter is composed of what? chemical elements
how many elements are essential for humans 25 elements
which elements make up what percent of the human body 4 O C H N, 96%
cells are what % water? 70%
what element is a major component of organic molecules? carbon
What trace elements are needed in small amounts to prevent disease? iron iodine zinc
chemical bonds sharing (covalent), gaining, or losing electrons(ionic)
structure of an atom nucleus has protons and neutrons, electrons exist in shells, outer shell can hold up to 8, atoms with incomplete shells tend to form bonds
covalent bonds share electrons
nonpolar electrons shared equally
polar unequal sharing, electrons pulled toward more electronegative atom
ionic electrons transferred, creates charged ions, opposite charges attract
hydrogen bonds weak attrition between polar molecules, H between and O
chemical reactions break old bonds and form new ones, changes composition of matter non is created or destroyed
properties of water life supporting
cohesion water molecules stick to each other
adhesion water sticks to other substances
moderates temperature heat absorbed/released when H bonds break/form
Evaporating cooling helps regulate body temperature
Ice floats solid water is less dense than liquid
excellent solvent dissolves polar or charged substances
pH scale measures acidity/basicity, logarithmic
pH 7 neutral
low pH acidic
High pH basic
buffers minimize changes in pH
water can split to H and OH
How rising CO2 levels affect coral reefs? CO2 reacts with water makes carbonic acid, lowers Ph which harms coral made of calcium carbonate
importance of carbon to molecular diversity carbon can bond with 4 other atoms, organic molecules contain c-c or c-h covalent bonds, carbon chains form the back bone of organic molecules, carbon atoms form chains, branches, and rings, carbon skeletons vary in length arrangement
4 biological macromolecules carbohydrates, lipids, proteins, and nucleic acids
carbohydrates monosaccharides, energy by carbohydrates -> Glucose -> Glycolysis
lipids energy by ->glycerol + fatty acids, hydrophobic molecules made mostly of C & H, triglycerides, saturated fats, unsaturated fats, phospholipids, steroids
proteins energy from protein-> amino acids, polymers of amino acids, amino groups and carboxyl group help form peptide bonds formed by dehydration, four levels of structure
nucleic acids nucleotides
dehydration reaction links monomers together to form polymers, produces water, forms bonds
hydrolysis uses water to break bonds, breaks polymers into monomers
monosaccharides single sugar molecules (monomers), building blocks of carbohydrates ex glucose, fructose
disaccharides two monosaccharides joined by dehydration ex sucrose, lactose, maltose
polysaccharides long chains of sugars, starch & glycogen for storage, cellulose for structural (plant cell wall)
triglycerides (lipids) glycerol + 3 fatty acids, used for energy storage
saturated fats (lipids) maximum hydrogen, solid at room temperature
unsaturated fats (lipids) one or more double bonds, liquid at room temperature (olive oil, seed oils)
phospholipids (lipids) components of cell membranes, form phospholipid bilayers
steroids (lipids) include cholesterol and hormones, cholesterol is part of membranes and precursor to other steroids
protein can have four levels of strucutre primary- amino acid sequence, secondary- alpha helices & beta sheets(Hbonds), tertiary-overall 3-D shape, Quaternary- multiple ploy peptides
protein functions enzymes, transport, defense (antibodies), Signals (hormones), receptors, muscle contraction, structural support; shape determines function
denature proteins destroys shape and function
nucleic acid DNA and RNA, made of nucleotides
nucleotide phosphate group, sugar, nitrogenous base
DNA double helix (two polynucleotide chains), contains genetic information, passed to offspring, provides the blueprint for proteins and controls cell life
RNA single chain, helps make proteins
gene expression DNA to RNA to Protein
microscopes allow scientist to see cells and cell structure that cannot be seen with the unaided eye, light-display living cells and large cell component in micrometers, electron-reveal small cell structure in nanometers due to greater magnification and resolution
prokaryotic cells do not have membrane-bound structures; cytosol, DNA, Ribosomes, Plasma membrane
eukaryotic cells have organelles, including nucleus; cytosol, DNA, Ribosomes, Plasma membrane
plant cells chloroplast, cell wall, plasmodesmata, central vacule; mitochondria (cell respiration) ER, Golgi apparatus, ribosomes, nucleus, cytoskeleton, plasma membrane
animal cells lysosomes, extracellular matrix, tight junctions, anchoring junctions, gap junctions; mitochondria (cell respiration) ER, Golgi apparatus, ribosomes, nucleus, cytoskeleton, plasma membrane
mitochondria carry out cellular respiration and convert chemical energy from food into ATP. They have two internal compartments and contain their own DNA and ribosomes.
chloroplasts convert light energy into chemical energy in glucose through photosynthesis. Thylakoids contain chlorophyll that traps light energy.
rigid cell wall projection & skeletal support
plasmodesmata sharing water nourishment and chemical messages
large central vacuole storing water, nutrients and waste
Endosymbiotic theory mitochondria and chloroplasts were formerly small prokaryotes that began living within larger cells. Both replicate independently and have their own DNA and ribosomes. The first endosymbiotic event produced mitochondria, & the second produced chloroplasts
cilia locomotor appendages made of microtubules, shorter and move like the oars of a boat
flagella locomotor appendages made of microtubules, longer and move cells with a whiplike motion
microfilaments thinnest, muscle contraction, cell shape, motility
intermediate filaments medium, structural support, anchoring organelles
microtubules thickest intercellular transport, chromosome movement
extracellular matrix made and secreted by animal cells, binds tissue cells together, supports the plasma membrane, and communicates with the cytoskeleton. Collagen is the major structural glycoprotein, and the ECM attaches to cells through other glycoproteins and integrins.
tight junctions bind cells to form leakproof sheet
anchoring junctions rivet cells into strong tissues
gap junctions allow ions and small molecules to flow from cell to cell
Plant cell walls protect cells, provide skeletal support, help keep plants upright, and are primarily composed of cellulose
Plasmodesmata allow plant tissues to share water, nourishment, and chemical messages.
four functional categories of organelles in eukaryotic cells gene expression, Manufacturing, distribution, and breakdown, energy processing, Structural support, movement, and intercellular communication
Gene expression nucleus and ribosomes
Manufacturing, distribution, and breakdown endomembrane system and peroxisomes
Energy processing mitochondria and chloroplasts
Structural support, movement, and intercellular communication cytoskeleton, plasma membrane, plant cell wall, and flagella/cilia
Cell size limited by surface area to volume ratio. Higher SA/V reduces the travel distance for molecules moving in and out of the cell and leads to greater efficiency in transporting nutrients, waste, signals, and heat
plasma membrane described by the fluid mosaic model, a diverse membrane proteins suspended in a fluid phospholipid bilayer, has hydrophilic heads & hydrophobic tails, plasma membrane has selective permeability, Proteins in the plasma membrane, perform various functions
Membrane proteins transport proteins, may act as enzymes that carry out sequential reactions, Serve as receptor proteins, act as attachment proteins, junction proteins, Glycoproteins serve as molecular ID tags recognized by other cells
transport proteins Allow specific ions or molecules to enter or exit the cell, Polar or charged substances pass through
receptor proteins bind signaling molecules and relay messages inside the cell
attachment proteins (integrins) that link the extracellular matrix to the cytoskeleton and provide structural stability
junction proteins that attach adjacent cells
Diffusion tendency of particles to spread out evenly in an available space (from high to low of that substance)
passive transport Diffusion across a cell membrane does not require energy
osmosis the diffusion of water across a selectively permeable membrane (permeable to water) from low solute to high solute
hypertonic solution higher solute levels
hypotonic solution lower solute levels
isotonic solution equal solute levels
Tonicity the ability of a surrounding solution to cause a cell to gain or lose water
facilitated diffusion which does not require energy and relies on the concentration gradient
Aquaporins channel transport proteins that allow water to cross
Exocytosis exports bulky molecules such as proteins or polysaccharides outside the cell.
Endocytosis reverse of exocytosis, moving small and large molecules into the cell
Phagocytosis a type of endocytosis where the plasma membrane wraps around large particles, forming a vacuole
Enzymes protein catalysts that speed up chemical reactions by decreasing the activation energy needed to begin a reaction, transport, defense
Competitive inhibitors compete with the substrate for the enzyme’s active site
Noncompetitive inhibitors alter enzyme function by changing the enzyme’s shape
endomembrane system Gogi apparatus, vesicle, both ER, lynsosomes
Smooth ER makes lipids
rough ER has ribosomes attached makes proteins
redox reactions used in cellular respiration oxidation (oil, loss) reduction (rig, gain), glucose is oxidized, oxygen is reduced to water, Electrons are transferred to NAD+, forming NADH
what bonds hold water together polar covalent bonds
photosynthesis in chloroplast, uses CO₂ + H₂O + energy (sunlight), produces C₆H₁₂O₆ (glucose) + O₂, captures 1% of sun energy
cellular respiration in cytosol (glycolysis) and mitochondria, uses C₆H₁₂O₆ + O₂, produces CO₂ + H₂O + ~32 ATP, converts 34% of glucose energy into ATP & 66% released as heat
how are photosynthesis and cellular respiration complementary processes Photosynthesis stores energy in glucose, and cellular respiration releases that energy to make ATP.
breathing (respiration) exchange of gases (02 in CO2 out)
Cellular respiration oxygen-requiring process inside cells that harvests energy from food to make ATP, about 32 ATP
chemical equation for cellular respiration C_6 H_12 O_6+6O_2→6CO_2+6H_2 O+32ATP
how does the human body use ATP body maintenance, voluntary activities, cellular work
oxidative phosphorylation
How ATP functions as transporting energy ATP → ADP + P + energy, ATP stores energy in its phosphate bonds, phosphate is removed (hydrolysis) energy released, this energy powers cellular processes, ADP recycled back into ATP
how the energy in a glucose molecule is released during cellular respiration redox reactions, electrons are removed from glucose (oxidation), electrons "fall" to oxygen through the electron transport chain, Energy released is used to make ATP
Dehydrogenase removes hydrogen (and electrons) from fuel molecules
NAD+ accepts electrons -> becomes NADH
NADH carries electrons to the electron transport chain
Electron transport chain (ETC) Electrons pass from carrier to carrier, energy released pumps H+ into the intermembrane space, Oxygen is the final electron acceptor, forms water (H₂O)
three stages of cellular respiration stage 1: Glycolysis, Stage 2: Pyruvate Oxidation & Citric Acid Cycle, Stage 3: Oxidative Phosphorylation
Glycolysis location: cytosol, glucose-> 2 Pyruvate, produces: 2 ATP (substrate-level phosphorylation) 2 NADH, does NOT require 02
Pyruvate Oxidation & Citric Acid Cycle location: Mitochondria, Pyruvate → Acetyl CoA, Produces: CO₂, NADH, FADH₂, 2 ATP (substrate-level phosphorylation), citric acid cycle run twice per glucose
Oxidative Phosphorylation location: inner mitochondrial membrane, includes: electron transport chain & chemiosmosis, NADH & FADH2 donate electrons, Oxygen becomes reduce to H2O, Produces about 28 ATP, makes most of the ATP (~32 total per glucose)
alcohol Pyruvate → CO₂ + Ethanol, Occurs in yeast & some bacteria, Occur without O₂ (anaerobic), Use glycolysis, Produce 2 ATP per glucose, Regenerate NAD+
lactic acid fermentation Pyruvate → Lactate, Occurs in muscle cells Occur without O₂ (anaerobic), Use glycolysis, Produce 2 ATP per glucose, Regenerate NAD+
pyruvate
Acetyl CoA fats or proteins
Citric Acid Cycle fat or proteins
fats or sugar have more calories fats contain twice as much
food provides raw materials for biosynthesis, intermediates from cellular respiration, ATP to drive biosynthesis
animals store most energy reserves as what? Fats
autotrophs producers of food consumed by heterotrophic organisms
Producers organisms that make organic molecules from inorganic sources
Heterotrophs consumer that feed on plants, animals, or decompose organic material
Photoautotrophs organisms (plants, algae, some protists & bacteria) that use light energy to make sugars
obligate aerobes organisms that require oxygen
facultative aerobes organisms that can survive with or without oxygen
chemical Equation for Photosynthesis 6CO_2+6H_2 O+Energy→C_6 H_12 O_6+6O_2
light reactions location: Thylakoid membranes, Reactants: light, H₂O, ADP + P, NADP⁺, Products: ATP, NADPH, O₂
light reaction process Water is split → releases O₂, Electrons move from Photosystem II to Photosystem I, Electron transport chain pumps H⁺ into thylakoid space, NADP⁺ is reduced to NADPH, Chemiosmosis drives ATP synthesis (photophosphorylation).
Calvin Cycle (Light-Independent Reactions) Location: Stroma, Reactants: CO₂, ATP, NADPH, Products: G3P (used to make glucose)
Calvin Cycle process (Light-Independent Reactions) 1. Carbon fixation 2. Reduction 3. Release of G3P 4. Regeneration of RuBP
Calvin Cycle uses Carbon from CO₂, Electrons from NADPH, Energy from ATP
properties & functions of pigments Pigments absorb certain wavelengths of visible light, Chlorophyll is a light-absorbing pigment in thylakoids, Green light is least effective because it is mostly reflected & transmitted, Pigments capture solar energy to drive photosynthesis
how photosystems capture solar energy Located in thylakoid membranes has Light-harvesting complexes & Reaction-center complex, Light excites electrons in chlorophyll a, Primary electron acceptor captures excited electrons, Energy is transferred through pigment molecules
Electron Transport Chain Electrons move from Photosystem II → Photosystem I, Energy released pumps H⁺ into thylakoid space, NADP⁺ is reduced to NADPH.
Chemiosmosis H⁺ gradient forms inside thylakoid space, H⁺ flows through ATP synthase back into stroma, ADP + P → ATP (photophosphorylation).
Oxygen Production Water is split in Photosystem II, O₂ is released as a byproduct.
C3 Plants Most common, Calvin cycle directly fixes CO₂, In hot, dry conditions: Stomata close, CO₂ drops, O₂ rises, Photorespiration occurs (RuBisCO uses O₂ instead of CO₂), Less sugar produced, Example: Wheat
C4 Plants Fix CO₂ into four-carbon compounds during daytime, These compounds supply CO₂ to the Calvin cycle, More efficient in hot, dry climates, Example: Corn
CAM Plants Fix CO₂ at night into four-carbon compounds, Stomata open at night, closed during day, Reduces water loss, Example: Agave
greenhouse effect Sunlight warms Earth, Earth radiates heat to atmosphere, CO₂ and other greenhouse gases absorb and radiate some heat back, This keeps Earth warm enough for life.
how reducing fossil fuel use & deforestation may moderate climate change Fossil fuels increase atmospheric CO₂, Plants can partially offset fossil fuel burning if forests are not destroyed
climate change Ice/snow melt, Rising ocean levels, Increased atmospheric CO₂
Created by: Lworzalla123
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