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Module 4
Bio181
| Question | Answer |
|---|---|
| Heterochromatin | Eukaryotic chromatin that remains highly compacted during interphase and is generally not transcribed. |
| Histones | Proteins that are responsible for the first level of DNA packaging in chromatin. |
| telomerse | an enzyme that catalyzes the lengthening of telomeres in eukaryotic germ cells. |
| single-strand binding proteins | binds and stabilizes single-strand DNA until it can be used as a template |
| Primase | synthesizes an RNA primer at 5' end of leading strand of each Okazaki fragment lagging strand. |
| DNA pol I | Removes RNA nucleotides of a primer from 5' end and replaces them w/ DNA nucleotides. |
| Ligase | Joins 3' end of DNA that replaces primer to rest of leading strand and joins Okazaki fragments of lagging strand. |
| nuclease | Enzyme used to cut out a segment of the strand that is damaged, resulting in a gap that is filled w/ a nucleotide. |
| Helicase | Helps unwind parental double helix at replication forks. |
| DNA pol III | using parental DNA as a template, it synthesizes a new DNA strand by covalently adding nucleotides to the 3' end of the pre existing DNA/ RNA |
| lagging strand | used to elongate a new strand of DNA in a mandatory 5 --> 3 direction, works away from the fork. |
| Translation | synthesis of a polypeptide which occurs under the direction of mRNA. ribosomes are the site of this. |
| aminoacyl-tRNAsynthase | enyzme that joins each amino acid to the appropriate tRNA |
| DNA Replication | 1. Parent molecule unwinds, two new daughter cells are built based on the base-pairing rules. 2. Replication begins at the origins of replication, and proceeds in both directions until it is completely copied. |
| TATA box | DNA sequence in eukarytic prometers crucial in forming the transcription initiation complex. |
| poly-Atail | sequence of 50-250 adenine nucleotides added onto the 3' end of a pre-mRNA molecule |
| Transcription | synthesis of RNA under the direction of DNA, produces mRNA, occurs in the nucleus |
| splicesome | made up of proteins and RNA molecules that splices RNA by interacting w/ends of RNA intron, releasing intron and joining the two adjacent exons |
| signal peptide | sequence of about 20 amino acid at or near the leading end of polypeptide that targets it to the ER or other organelles. |
| signal-recognition particle | protein-RNA complex that recognizes signal peptide as it emerges from a ribosome and helps direct it to the er by binding protein ER |
| purine/pyrimidine | purines (A,G) pyrimidine (T,C). |
| ribozyme | RNA molecule that fxns as an enzyme catalyzing reaction during RNA splicing |
| tRNA | fxns as an interpretor between nucleic acid and protein language by picking up specific amino acids and recognizing the appropriate codons. |
| RNA polymerase | pries two strands of DNA apart ad joins the RNA nucleotides as they base-pair along the DNA template |
| Primer material | short stretch of RNA with a free 3' end bound by complementary base pairing to the template strand elongated w/DNA nucleotides during DNA replication. |
| Introns/ exons | introns- noncoding segments of nucleic acid that lie between coding regions exons- eventually expressed usually by being translated into amino acid sequences. |
| bonds in a DNA double helix | hydrogen bonds A-->T G-->C |
| template strand | DNA strand used to provide a pattern or template for the sequence of nucleotides in RNA transcript. |
| chromatin | proteins and DNA |
| energy source for synthesis | phosphate bonds on the nucleotide triphosphates. |
| replication bubble | speeds up the copying of DNA molecule |
| Chargoff's rules | states that in any species there is an equal number of A and T bases and an equal number of G and C bases. |
| mRNA | carries genetic message from the DNA to the protein-synthesizing machienary of cell. |
| rRNA | most abundant type of RNA used with proteins to make ribosomes |
| Gene expression | process by which DNA directs protein synthesis. Two stages transcription and translation, the nuclear envelope seperates the two. |
| replication fork | Y- shaped region where the parental strands of DNA are being unwound. |
| euchromatin | the less condensed form of eukaryotic chromatin that is availible for transcription |