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Bio Exam 3

TermDefinition
Why do genes need to be regulated? Gene regulation helps cells function properly and become specialized, even though they have the same DNA.
Why do different cells look different with the same DNA? Gene expression varies in different cells, turning on/off specific genes based on cell function.
How is gene expression different in prokaryotes vs. eukaryotes? Prokaryotes use operons for quick control; eukaryotes have complex control at many levels (DNA, RNA, protein).
What is an operon? A group of genes in bacteria that are controlled together under one promoter.
What is the lac operon? A bacterial gene system that turns on when lactose is present and glucose is low.
What is catabolite repression? A way bacteria prefer glucose over lactose; glucose prevents lac operon from turning on.
lac operon vs. trp operon lac = inducible (off until lactose is present); trp = repressible (on until tryptophan is present).
What is the transcription initiation complex in eukaryotes? A group of proteins (including TATA box, GTFs) that help start transcription.
How are activators and repressors different in eukaryotes and prokaryotes? Eukaryotes have more complex, distant enhancers/silencers; prokaryotes have simpler, direct regulators.
What is DNA packaging? DNA is wrapped around histones: tightly packed = heterochromatin (off), loosely packed = euchromatin (on).
What is histone acetylation? Adding acetyl groups to histones loosens DNA, making genes easier to express.
What is DNA methylation? Adding methyl groups silences genes by making DNA tighter.
What is alternative splicing? One gene makes multiple proteins by reusing pieces differently.
What are microRNAs? Small RNAs that block translation or destroy mRNA to control gene expression.
How does translation regulation work? E.g., Iron levels control translation of proteins that handle iron in cells.
What is post-translational regulation? Control after proteins are made, like folding, cutting, or adding tags.
What is a mutation? A change in DNA sequence.
Types of point mutations Silent (no change), missense (changes amino acid), nonsense (stop), frameshift (shifts reading frame).
What causes sickle-cell anemia? A missense mutation that changes hemoglobin shape and function.
Can mutations outside coding regions affect genes? Yes, they can affect how genes are turned on/off.
Somatic vs germ-line mutation Somatic = body cells (not inherited), Germ-line = sperm/egg (inherited).
Common causes of mutations Radiation, chemicals, copying errors, base analogs.
How does UV cause mutations? UV creates DNA damage; repair systems fix it. Defects cause diseases like Xeroderma pigmentosum.
What is cancer? Uncontrolled cell growth from mutations.
What are proto-oncogenes and tumor suppressor genes? Proto-oncogenes = promote growth; tumor suppressors = stop growth. Mutations can lead to cancer.
What mutations are linked to cancer? Gene amplification, missense, chromosomal changes (e.g., Philadelphia chromosome).
What are cell cycle checkpoints? Steps where the cell checks for damage before dividing.
What do cyclins and CDKs do? Control cell cycle progression.
What is the p53 gene? A tumor suppressor that stops damaged cells from dividing; often mutated in cancer.
What is the two-hit model of retinoblastoma? Both copies of a tumor-suppressor gene must be mutated for cancer to develop.
What is chromatin? DNA + proteins (histones) packed in the nucleus.
What are nucleosomes and 30-nm fibers? Nucleosomes = DNA wrapped around histones. 30-nm fibers = more compact structure.
Mitosis vs. Meiosis Mitosis = identical cells (growth), Meiosis = gametes (variation).
Order of stages in mitosis and meiosis Prophase → Metaphase → Anaphase → Telophase → (Cytokinesis)
What is cytogenetics? Study of chromosomes and their structure.
What is a karyotype? Picture of chromosomes used to detect abnormalities.
Why are offspring more diverse than parents? Meiosis mixes genes (crossing over and independent assortment).
What are trisomic and monosomic conditions? Trisomic = extra chromosome (e.g., Down), Monosomic = missing chromosome.
Why is Mendel important? He discovered basic inheritance rules using pea plants.
Monohybrid vs Dihybrid cross Monohybrid = 1 trait, Dihybrid = 2 traits.
P, F1, F2 generations P = parent, F1 = first kids, F2 = grandkids.
Homozygous vs heterozygous Homo = same alleles, Hetero = different alleles.
Dominant vs recessive Dominant = shows with one copy, Recessive = needs two copies.
Genotype vs phenotype Genotype = genes, Phenotype = traits you see.
What is a test cross? Cross with homozygous recessive to find unknown genotype.
Phenotypic/genotypic ratios Monohybrid = 3:1 pheno, 1:2:1 geno; Dihybrid = 9:3:3:1.
Law of Segregation Each parent gives one allele for a trait.
Chromosomal theory of inheritance Genes are on chromosomes.
What is pedigree analysis? Tracking inherited traits through families.
Cystic Fibrosis vs Huntington’s CF = recessive, Huntington’s = dominant.
What are X-linked traits? Traits on X chromosome; males more affected (1 X only).
Inheritance of Hemophilia A X-linked recessive; mostly in males.
Why did Morgan use fruit flies? Fast life cycle, easy traits.
Why white-eyed males in Morgan’s experiment? Gene was X-linked; only males got it.
What is pleiotropy? One gene affects many traits (e.g., Marfan syndrome).
What is polygenic inheritance? Many genes affect one trait (e.g., skin color).
What is incomplete dominance? Blending traits (e.g., red + white = pink flowers).
What are multiple alleles? More than 2 allele options (e.g., ABO blood types).
Nature vs nurture Both genes and environment shape traits.
What is epistasis? One gene controls whether another gene shows.
What is recombination frequency? % of offspring with new gene combos = distance between genes (in map units/cM).
What are linked genes? Genes close together that travel together during meiosis.
What is cytoplasmic inheritance? Genes from mitochondria/chloroplasts, mostly from mom.
What is epigenetic inheritance? Gene changes not in DNA sequence; can be passed but often reversible.
What is X-inactivation? One X in females turns off = Barr body; leads to calico cat fur patterns.
What is genomic imprinting? Only mom’s or dad’s gene copy is active (e.g., Igf-2 in mice).
Structure of bacterial DNA Circular chromosome in the cytoplasm.
What are plasmids? Small DNA circles in bacteria; can carry useful genes.
How do bacteria reproduce? Binary fission (copy and split).
DNA transmission methods in bacteria Conjugation (cell-to-cell), Transformation (free DNA), Transduction (virus transfer).
What is conjugation? DNA transfer using F factor (fertility plasmid).
What is horizontal gene transfer? Gene sharing between different organisms (not parent to offspring).
Basic virus structure DNA/RNA inside a protein coat.
Lytic vs Lysogenic cycle Lytic = burst cell fast; Lysogenic = hide in DNA first.
HIV life cycle Infects helper T-cells; uses reverse transcriptase to copy RNA into DNA.
What cell does HIV infect? Helper T-cells (CD4+)
What is reverse transcriptase? Enzyme that makes DNA from RNA (used by HIV).
What are prions? Misfolded proteins that cause brain diseases (e.g., mad cow).
Created by: asteegman
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