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Nucleic Acids
| Question | Answer |
|---|---|
| What is DNA? | Blueprint for life Double stranded helix Chromosomes 3 forms: B-DNA, A-DNA, and Z-DNA |
| What is RNA? | Copy of DNA Blueprint for proteins Single stranded -3 forms: mRNA,tRNA, and tRNA |
| What are the components of nucleic acids? | a sugar, phosphate and base |
| What is a nucleotide? | The functional form of a nucleic acid, is charged and can carry 1,2 or 3 phosphates |
| What is a nucleoside? | Form of a nucleic acid that does not have a phosphate attached |
| DNA vs. RNA | RNA has uracil, not thymine Both form helices DNA is double stranded -RNA is single stranded -5' position holds phosphate groups -3' position OH bonds to phosphate |
| What are the 4 ribonucleosides? | Adenosine Guanosine Uridine Cytidine |
| What are the 4 ribonucleotides? | Adenylate(AMP) Guanylate(GMP) Uridylate(UMP) -Cytidylate(CMP) |
| What are the 4 deoxyribonucleosides? | Deoxyadenosine Deoxyguanosine Deoxythimidine Deoxycytidine |
| What are the 4 deoxyribonucleotides? | Deoxyadenylate(dAMP) Deoxyguanylate(dGMP) Deoxythymidylate(dTMP) -Deoxycytidylate(dCMP) |
| Define Central Dogma? | How we process DNA How we get cellular processes Cellular replication -Cell division |
| What are genes? | DNA in compact form(chromosomes) Gene sequence gives us proteins Mixture of DNA and proteins(histones) |
| What are the "violations" of Central Dogma? | Discontinuous nature of eukaryotic genes(exons and introns) Reverse transcriptase(some viruses such as HIV; deliver RNA--> makes DNA) Enzymatic activity of RNA(rRNA is also an enzyme) |
| Polymerase Chain Reaction | Outside or inside the cell Polymerase= enzyme Performs transcription Amplifes number of copies for specific regions Allows study of segment and its effect on the cell |
| Watson-Crick Double Helix | Rotates around central axis Winds around each other Has major and minor grooves 2 strands are antiparallel |
| What is B-DNA? | Is the Watson & Crick model Standard configuration Very flexible Propeller twisting of base pairs Right handed Major and minor grooves |
| What is A-DNA? | Compact form of DNA Dehydrated Less flexible Sugar pucker-reduces flexibility |
| What is Z-DNA? | Left handed |
| Higher order structue of DNA | Super coiling :circular DNA :compacts DNA Chromosomes :proteins-histones :allow DNA to wrap around :multiple histones linked :compact complex structure |
| Higer order RNA structure | tRNA Secondary :helices :loops and stems :stabilized by proper base pairs Tertiary :3 dimensional folding :analogous to tertiary protein rRNA |
| What are the five bases? | Adenine(A) Guanine(G) Cytosine(C) Thymine(T) Uracil(U)-only in RNA |
| What bases are pyrimidines? | Cytosine and Thymine |
| What bases are purines? | Adenine and Guanine |
| rRNA(ribosomal RNA) | Loops Some structural Some active sites rRNA=enzyme Secondary and tertiary structure More complex than tRNA |
| What are restriction endonucleases? | Enzymes that cut DNA at palendromic sequence AT TA |
| What is DNA ligase? | An enzyme that seals DNA nicks |