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Microbiology

Celebration 1 Material

TermDefinition
Two positive and two negative impacts of microorganisms + Probiotics (human microbiome), nutrient cycling, biotech - Diseases (parasites, virus, bacteria), decaying (food, wood, etc.)
Microbiology is Study of microorganisms/microbes, which are things too small to see with the naked eye
Nonliving/noncellular entities Viruses and prions. DON'T METABOLIZE
Prokaryotes Bacteria and archaea. Have no nucleus, smaller than euk with no membrane bound organelles
Eukaryotes Protists, fungi, helminths. Have nucleus and organelles, bigger than prokaryotes
Pathogens Can cause disease in a healthy human
Opportunistic pathogens Take advantage of a weakened immune system
Robert Hooke Used compound microscope to look at plants, named the "cell"
Antonie van Leeuwenhoek Made superior microscopes with a magnification power of up to 300x. First to observe living microbes
Theories for origin of life Spontaneous generation or biogenesis
Spontaneous generation Theory that life comes from nonliving items, proven false by Pasteur's S-necked flask experiment
Biogenesis Life emerges from existing life
Louis Pasteur Helps demonstrate Germ Theory of Disease, showed microbes caused fermentation/spoilage, disproved spontaneous generation, developed pasteurization, and made rabies vaccine
S-necked flask experiment By Louis Pasteur. Flask trapped microbes outside of flask containing broth, allowing air passage. When they aren't introduced, broth doesn't spoil, and when they are it does. Disproved spontaneous generation.
Why was it important that in the S-necked flask experiment the broth was heated in the same flask it was cooled in? The new flask may have had microbes, and some from the air may be introduced during transfer.
Miasma theory Said diseases were caused by "bad air", is replaced by Germ Theory
Robert Koch Koch's postulates that verified Germ Theory and enabled people to get pure cultures. He identified cause of anthrax, TB, and cholera
Koch's postulates 1. The same organism must be in every case of the disease but not present in the healthy 2. Organism must be isolated from host and grown as pure culture 3. Isolated organism should cause same disease when inoculated in new host 4. Reisolate org
What are the limitations of Koch's postulates? Difficult if microbes have complex life cycle, prions and viruses can't be cultured by themselves, requires obvious and unique symptoms, and requires model organisms to inoculate (ethics)
Aseptic techniques Strategies that prevent infection (microbe transmission). Includes handwashing and sterilization
Ignaz Semmelweis Developed first antiseptic techniques in hospital setting, and recommended hand-washing to decrease mortality rate from childbed fevers
Joseph Lister Proved sterilizing instruments and sanitizing wounds with carbolic acid prevented pus formation
Florence Nightingale Established aseptic techniques in nursing, founder of modern nursing
Three domains of life on Earth Bacteria, archaea, eukarya
Bacteria Most are single-celled with peptidoglycan in cell wall. Most are non-pathogenic and play major role in nutrient cycling
Archaea Most are single-celled with no peptidoglycan, associated with extremes (heat, salt conc, etc.) and has no known pathogens
Eukarya Animals, plants, fungi, and protists. Unicellular or multicellular. Most have nucleus and organelles and are larger than bacteria/archaea
Nomenclature for microorganisms Genus species (IN ITALICS) Escherichia coli (E. coli)
Strains Same species but with variations in behavior (biovars, serovars, morphovars, and pathovars). Bacteria and archaea are themes, so can be difficult to classify/name. Uses genetics (16s rRNA gene)
Microbiome Functional collection of different microbes in a particular environmental system (human microbiome)
Microbiota Describes all microbes in a microhabitat (skin microbiota)
Exclusionary principle All the good areas of the body to support microbes are taken up by semi-benign microbes and crowd out worse ones
Beneficial microbial contributions to human health Vitamin synthesis, gas production, trains immune system to respond
______ delivery is better at establishing microbiota for the first year of human life. Vaginal (instead of C-section)
What determines nature of gut microbiome? Types of food eaten. Wants more variety.
Biofilms Can form on any surface (including medical instruments). Is extracellular biosaccharide produced by bacteria on a solid surface
Why are biofilms a problem in healthcare? Resistant to disinfectants and antibiotics because of film and can grow lots of places
Planktonic bacteria Swimming bacteria
What elements make up 96% of the cell? CHNOPS
Carbohydrates C H O
Proteins C H O N S (amino acids)
Lipids C H O
Nucleic acids C H O N P
Three classification types for microbial media Physical nature (solid, liquid, etc.) Chemical constituents they include (nutrient, etc.) Function (what's it for?)
Colonies Isolates masses of cells that are grown on solid media
Colony morphology How different colonies look (shape, size, texture, density, etc.)
Benefits of agar Not digestible for most microbes, provides framework to hold moisture and nutrients, and can be liquified at a not too high temperature
Pure culture When specific types of microbe is isolated from a diverse sample
Magnification power Ability to enlarge objects
Resolving power Ability to show detail
Contrast
Why are stains and dyes used? Increases contrast so structures of cells are revealed, and enables the culture to be used diagnostically (can tell difference between types of cells)
What is needed for a stain/dye to be effective? Ability to bind to cell and a chromophore group
Why is the Gram stain important? Is most common stain, divides bacteria into two groups based on diff in cell wall structure
Name other stains besides Gram stain Flagella staining, negative staining for capsules, heat used for endospores
Why would an e- microscope provide higher resolution than a light microscope? e- are much smaller and can fill more spaces
Transmission Electron Microscopy (TEM) Sees cross sections
Scanning Electron Microscopy (SEM) Sees e- bounce off the top of thing being scanned
Created by: RunningMads
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