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Bio Chapter 10
Gene expression, transcription and translation
| Question | Answer |
|---|---|
| key processes of gene expression | transcription and translation |
| Transcription | produces an RNA copy of a gene |
| Translation | interprets the nucleotide sequence in the mRNA to build a polypeptide |
| Central dogma | DNA > RNA > Protein |
| Central dogma exceptions | some genes end at RNA as the final product |
| Genes | provide a blueprint |
| Polypeptides | coded from structural genes |
| One or several polypeptides function as a | protein |
| DNA must be accessed | at the molecular level for genes to be expressed |
| The product of transcription | often a protein but can be RNA |
| Important sequences of transcription | promoter, transcribed region, terminator, and regulatory sequences |
| 3 stages of Transcription | initiation, elongation, termination |
| initiation in transcription | recognition step where the promoter is the start here signal |
| In bacteria what is used in the initiation step | sigma factor, binds RNA polymerase |
| Open complex | when DNA strands are separated |
| Elongation in transcription | occurs as RNA polymerase synthesizes RNA |
| Template strand | is the DNA Strand used as a template |
| Coding strand | the opposing strand |
| Transcript | is synthesized in the 5'to 3' direction |
| Termination in transcription | occurs when RNA polymerase reach a terminator, releases the transcript |
| The basic features of transcript | are similar among all organisms |
| Transcription of eukaryotic genes require | more complexity |
| The product of transcription in Eukaryotes | pre-mRNA |
| Pre-mRNa | a precursor that is processed to form a mature mRNA |
| In RNA modification in eukaryotes what is added? | 5'cap and 3 poly A tail |
| Splicing | the introns are removed and Exons are connected together |
| introns | intervening regions |
| exon | expressed regions |
| When does capping occur | when modified form of guanine is covalently attached to the 5' end |
| 5'cap function | For mRNA to exit the nucleus and bind the ribosome |
| Poly A tail purpose | increases the stability of the mRNA in the cytosol |
| Spliceosome | a complex that removes introns |
| The make up of a spliceosome | composed of Subunits, SnRNP, contains small nuclear RNA. and a set of proteins |
| Alternative splicing | allows complex eukaryotes to use the same gene to make different proteins |
| Splicing occurs | in a series of 4 steps |
| In step 1 of splicing | SnRNP subunits attach to the branch site/introns |
| In step 2 of splicing | additional SnRNP subunits gather at the site and form a loop with the intron |
| In step 3 of splicing | The intron is cut, 2 SnRNPs are released |
| In step 4 of splicing | The exon 1 and 2 covalently bond and the intron and the remaing SnRNPs are degraded |
| genetic code | specifies the relationship between the sequence of nucleotides in the mRNA |
| codons | a group of 3 nucleotides (code) |
| There are ____ different codons | 64, 1 start codon 3 stop codons and 61 codons |
| A code is redundant when | more than 1 codon can specify the same amino acid |
| Key components for translation | Ribosomal-binding site, start codon, coding sequence, and a stop codon |
| AUG | a start codon |
| the three stop codon | UAA, UAG, UGA |
| the start codons defines | the reading frame |
| Codons are read in | 5' to 3' |
| 5' end | phosphate end |
| 3' end | Hydroxide end |
| Transfer RNA (tRNA) | are involved in the translating the nucleotide base sequence of the mRNA into an amino acid sequence |
| DNA is _______ to make ____RNA | Transcribed, Messenger |
| mRNA is __________ to make _____RNA to make polypeptides | Translated, Transfer |
| In 1964, who discovered that synthetic RNA triplets can act like codons, causing a tRNA molecule to bind to the ribosome | nirenberg and leder |
| tRNA common features | 2-D cloverleaf structure with 3 loops anti codon located in the middle loop, 3' single-stranded region site , 3-D structure |
| anti codon | the complementary pair of RNA |
| Different tRNA is encoded by | a different gene |
| aminoacyl-tRNA synthase | the enzyme that catalyze the attachment of amino acids to tRNA molecules |
| Charged tRNA | when an amino acid is attached to tRNA |
| ribosomes are the sites of | translation |
| 3 sites in the ribosome where tRNA may be located | The aminoacyl (A) site, Peptidyl (P) site, the exit (E) site |
| if a species diverge a long time ago the gene sequences | are different |
| if a species diverge a short time ago the gene sequences | are similar |
| Translation occurs in 3 stages ..... | initiation, elongation, termination |
| Initiation in Translation | mRNA, tRNA, ribosomal subunits form into a complex |
| elongation in Translation | the ribosome moves in the 5' to 3' direction, synthesizing a polypeptide |
| Termination in Translation | the ribosomes reaches a stop codon and the complex disassembles, releasing the polypeptide |
| initiation factors | are proteins that help assemble the mRNA, tRNA, and a forming ribosomes into a complex |
| GTP | Guanin triphosphate |
| hydrolyze | break down |
| the elongation stage of translation involves ___ | Covalent binding of amino acids to eachother |
| elongation factors | hydrolyze GTP to provide energy to bind tRNA |
| the 3 Stop codons in translated are recognized by | a recognition factor |