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microbiology 2
definitions
| Term | Definition |
|---|---|
| cytoplasm | contains organelles (dissolved nutrients, salts, structures), where most chemical reactions occur |
| nucleus | contains genetic material (DNA), controls cells activities |
| cell membrane | controls what goes in and out of the cell |
| mitochondria | organelles that contain enzymes for respiration, where most energy is released during respiration |
| ribosomes | tiny structures where protein synthesis occurs |
| chloroplast | contains enzymes needed for photosynthesis |
| cell wall | protection, made of cellulose |
| permanent vacuole | cell sap to keep cell swollen, storage area |
| chromosomal DNA | DNA of bacterial cells found loose in cytoplasm, not contained within nucleus |
| plasmid DNA | move from one bacterium to another, closed circles of DNA called plasmids in cytoplasm |
| cell theory | cell is the smallest form of life, basic unit for all living organisms |
| eukaryotic | membrane bound cell organelles, has nucleus |
| prokaryotic | no membrane bound cell organelles, no nucleus |
| glycocalyx | matrix that surrounds cells, contains polysaccharides cell to cell communication, binding of cells to extracellular matrix, protects from pathogens |
| pathogenicity | the ability of an organism to cause disease |
| archaea | does NOT contain peptidoglycan contains pseudopeptidoglycan |
| algaea | contains cellulose, glycoproteins |
| fungi | contains cellulose, chitin, glucosamine |
| plant cells | contains cellulose, hemicellulose, pectin |
| bacterial cell wall | cross linking peptidoglycans, hexose sugars cross linked with short peptides |
| gram+ cell wall | thick, small periplasmic space contains teichoic and lipoteichoic acid easily treated exotoxins |
| gram- cell wall | thin, large periplasmic space more complex outer membrane that provides cover harder to treat exo and endotoxins anchored to lipoprotein molecules of peptidoglycan layer |
| surface appendages of prokaryotes pili | rigid and shorter than flagella composed of protein (pilin) adhesion, twitching, conjugation |
| surface appendages of eukaryotes microvilli | membrane extension absorption/secretion/adhesion/motility |
| surface appendages of eukaryotes cilia | structurally identical to flagella BUT shorter in movement on surface, move fluid over surface |
| filament contains... | flagellin (protein subunits) |
| located at the end of filament | hook |
| the body to which the hook is anchored | basal body |
| basal body consists of... | one rod, two pairs of discs |
| monotrichous | single polar structure at end of bacterium |
| lophotrichous | flagella in tufts at one or both ends |
| amphitrichous | single polar structure at both ends |
| peritrichous | flagella distributed over surface of bacterium |
| bacterial mobility | moves CW or CCW runs (swims) or tumbles |
| taxis | movement away or towards stimulus |
| biofilms | collection of surface associated microbes enclosed by polysaccharide matrix also includes non cellular material grows through cell division and recruitment |
| chloroplasts | founds in plants and algae contains chlorophyll + enzymes |
| stroma | contains small circular DNA |
| photosynthesis | converting sun energy into chemical energy 6CO2 + 12H2O + LIGHT ENERGY -> GLUCOSE + 6O2 + 6H2O |
| vacuoles | membrane bound storage |
| monolayer | storage gas inclusions allow bacteria to float |
| ribosomes of eukaryotes | 80s |
| ribosomes of prokaryotes | 70s |
| passive transport | no cellular energy brownian movement |
| active transport | requires cellular energy against concentration gradient |
| diffusion | movement of molecules from area of higher concentration to area of lower concentration until molecules are evenly distributed |
| facilitated diffusion | carrier mediated, specific and competitive with concentration gradient |
| osmosis | diffusion of water through selectively permeable membrane with concentration gradient |
| filtration | movement of molecules through membrane along gradient driving force is hydrostatic pressure or gravity |
| pump transport | required hydrolysis of ATP carriers are transmembrane proteins carry ions or molecules to other side of membrane |
| endocytosis | bulk transport, extracellular material brought into the cell |
| phagocytosis | cell eating |
| pinocytosis | cell drinking |
| exocytosis | large molecules (polypeptides, proteins, ect.) excreted from the cell |
| CARBON SOURCE autotrophs | biosynthesize all cell material from CO2 |
| CARBON SOURCE heterotrophs | biosynthesize all cell material from complex organic substances |
| ENERGY SOURCE phototroph | light as source of energy |
| ENERGY SOURCE lithotroph | oxidation of minerals as source of energy |
| ENERGY SOURCE organotroph | metabolism of organic compounds from complex to smaller as source of energy |
| aerobic cellular respiration | requires oxygen |
| steps of aerobic cellular respiration | glycolysis -> krebs cycle -> electron transport chain |
| anaerobic cellular respiration | doesn't require oxygen |
| steps of anaerobic cellular respiration | glycolysis -> fermentation |
| replication prokaryote | replication in cytoplasm |
| replication eukaryote | replication in nucleus |
| transcription prokaryote | transcription in cytoplasm |
| transcription eukaryote | transcription in nucleus |
| what is translation? | mRNA into amino acids via transfer rRNA |
| translation prokaryote | translation in cytoplasm |
| translation eukaryote | translation in cytoplasm and endoplasmic reticulum |
| DNA replication | cell makes an identical copy of its DNA at beginning of every cell division (S phase) |
| bacteria DNA ? | circular DNA, one chromosome |
| eukaryotes DNA ? | multiple chromosomes |
| transcription | from DNA to RNA |
| codon | every 3 nucleotide bases codes for specific amino acid |
| promoter | beginning sequence of transcription |
| terminator | ending of transcription |
| translation | mRNA directs addition of amino acids during synthesis |
| initiation | tRNA brings first amino acid in polypeptide chain to bind to start codon on mRNA AUG start codon |
| elongation | tRNA brings amino acids one by one to add to polypeptide chain |
| termination | release factor recognizes stop codon UAG stop codon |
| tRNA | cloverleaf structure anticodon on one end, correlation amino acid on other binds to codon on mRNA |
| binary fission | form of asexual reproduction single cell separates into identical daughter cells, each with identical copy of parental DNA |
| Where are anticodons? | In the tRNA |
| What are the domains of life? | Bacteria, Archaea, and Eukarya |