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2.4 Proteins
| Question | Answer |
|---|---|
| proteome | entire set of proteins expressed by the genome |
| monomer of a protein/polypeptide | amino acid |
| 3 parts of an amino acid | amino group, carboxylic group, R group |
| What makes an amino acid structurally different? | the R group |
| R group of polar amino acids | hydrophilic |
| R group of nonpolar amino acids | hydrophobic |
| number of different amino acids | 20 |
| What determines the sequence of amino acids in a polypeptide? | genes in DNA |
| location of the creation of polypeptide chains | ribosome |
| How do monomers create a dipeptide/polypeptides? | amino acids bond together |
| How is a dipeptide / polypeptide is broken down into its monomers? | hydrolysis |
| Primary structure | sequence of amino acids, influences all other levels |
| Secondary structure | folding into an alpha helix, beta-pleated sheet or random coil, hydrogen bonds between amino and carboxylic groups |
| Tertiary structure | folding into complex 3D shapes, interactions between side groups |
| Quaternary structure | multiple polypeptides interacting, forms a large single protein |
| importance of polar and non-polar amino acids in membrane proteins | polar amino acids create the inside of the channel where the water is while nonpolar amino acids stay away from water creating the outside of the protein |
| fibrous proteins | thin and thread-like, often play structural roles |
| globular proteins | spherical, play active roles in metabolism |
| collagen | fibrous, maintains structure in connective tissue |
| spider silk | fibrous, makes webs |
| rubisco | globular, fixes CO2 in the Calvin cycle |
| immunoglobulin | globular, creates immune responses |
| insulin | globular, decreases blood sugar levels |
| rhodopsin | globular, helps vision in low light |
| denaturation of a protein | proteins break down when not in optimal conditions, especially temperature or pH level. The hydrogen bonds break and the tertiary and quaternary levels are irreversible changed. |