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Enzymes
| Question | Answer |
|---|---|
| Transition State | the intermediate point between breaking old bonds and forming new bonds. temporary, unstable intermediate |
| what happens when the bond is very unstable? | higher potential energy |
| Activation Energy(Ea) | minimum energy required to form the transition state |
| Catalyst | speeds up a chemical reaction without being used up or changed in the process |
| Substrates | reactants |
| Active site | this is where substrates bind and react in |
| Step 1: Initiation | enzymes bring substrates together in a precise orientation |
| Step 2: transition state facilitation | enzymes lower activation energy(Ea) by stabilizing the transition state |
| Step 3: Termination | products have a low affinity for the active site and are released |
| Induced fit | enzymes change their shape upon binding substrates |
| Cofactors | metal ions such as zinc, magnesium, and iron |
| Coenzymes | organic molecules(carbon based molecules) such as NAD+, FAD, Coenzyme-A these help in the process of taking away electrons |
| Prosthetic groups | atoms or molecules that are permanently attached to proteins hemoglobin- carry oxygen in our body retinal(vitamin A)- basis of vision |
| competitive inhibition | compete with the actual substrate and binds to the active site. |
| Allosteric inhibition(noncompetitive) | Binds to a different structure |
| Allosteric activation | helps the active site stay open so that more substrates can go in |
| Catabolic pathways | Break down molecules , they usually release energy |
| Anabolic pathways | build up molecules, they usually require energy |
| Feedback inhibition | activity of enzyme is inhibited by the end product |
| what are some limitations of an enzymes structure and function? | |
| what are the components of a free energy diagram that enzyme doesn't change? | Gibbs free energy and energies of the reactants and products. |
| why do enzymes work best at optimal conditions? | At extreme levels they are denatured At low levels the reaction rate of the enzymes is slowed down. |
| what determines an enzyme's optimal temp and pH? | The environment. |