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micro-catabolism
micro lecture 2-catabolism
| Question | Answer |
|---|---|
| What are the two mechanisms for energy conservation in chemoorganotrophs, and how are they similar, how are they different? | fermentation and respiration, in both the synethesis of ATP is driven by the energy released in oxidative-reduction reactions, fermentation is without oxygen, respiration is with oxygen. |
| How does fermentaion and respiration differ in the mechanism by which ATP is synthesized? | In fermentation ATP is produced by substrate level phosphorylation, and in respiration ATP is produced from oxidative phosphorylation. |
| Sbstrate-level Phosphorylation | ATP is synthesized during steps in the catabolism of an organic compound |
| Oxidative phosphorylation | ATP is produced at the expense of the proton motive force, energized membrane |
| Photo-phosphorylation | a third form of ATP synthesis, occurs in phototrophic organisms, similar to oxidative phosphorylation except light is used instead of chemical compound drives redox reactions that generate proton motive force |
| What are the major things to know about glycolysis? | Breakdown of glucose to pyruvate, requires ATP to phosphorylate glucose twice, NAD is reduced to get NADH which are recycled later, net ATP is +2, also get 2 pyruvate |
| What is the importance of pyruvate? | All fermentation products are made from pyruvate, such as lactate and ethanol |
| What is the role of NAD/NADH in glycolysis? | electron transport |
| Why does fermentaion only release a small amount of energy from the primary electron donor? | the carbon is not completely oxidized and the difference in E0 is small |
| Aerobic resperation | oxidation in which O2 is the final electron acceptor |
| What are the two types of electron transport carriers and what are exmples of each? | Protien-NADH dehydrogenase, flavoprotiens, Iron-sulfur protiens, Cytochromes; Non-protien carriers- Quinones |
| NADH dehydrogenases | membrane bound, binds NADH, transfers 2e and 2H to flavoprotiens |
| Flavoprotiens | protiens bound to riboflavin derivative, accepts 2e and 2H from NADH dehydrogenase, donates 2e to next carrier |
| Iron sulfur protiens | Non-heme, carry electrons ONLY, electon potentials vary, contain Fe-S clusters |
| Cytochromes | heme prosthetic group, iron center, single electron transfer, reduction potentials vary |
| Quinones | hydrophobic, found in membrane, accepts 2e and 2H from previous carrier, donates 2e to next carrier |
| What does electon transport allow for? | separation of protons and electrons, the transfer of protons outside charges membrane like a battery, the potential energy is used to do work in the cell |
| Inhibitors | block electron transport, prevent establishment of a proton gradient, examples are carbon monoxide and cyanide |
| uncouplers | allow protiens to pass across the membrane by making them leaky, which bypasses the use of ATPase, example is dinitriphenol |
| What is the importance of the CAC cycle? | pyruvate is completely oxidized to CO2, many ATP produced, key role in catabolism, a number of the key intermediates can be drawn off for biosynthetic purposes |
| How does the role of pyruvate differ in fermentation and respiration? | In fermentation pyruvate is reduced and converted to fermentation products, but in respiration pyruvate is completely oxidized to form CO2 |
| What do the CAC and glycolysis have in common? | both used for energy production, reducing potential and intermediates for biosynthetic needs |
| What are the catabolic alternatives? | Anaerobic respiration, Chemolithotrophy and photoprophy |
| anaearobic respiration | a mode of respiratory energy generation in which electron acceptors are anything other than oxygen, such as sulfate and ferric iron |
| chemolithotrphy | an alternate mode of energy generation that involves inorganic chemicals rather than organic |
| phototrophy | the use of light in ATP synthesis |