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Chapters 9,6,11,12

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Term
Definition
Three basic parts of a nucleotide are   Phosphate deoxyribose sugar nitrogenous base  
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The 2 strands of DNA are joined to each other or held together by   hydrogen bonding  
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Which of these are base paired correctly? C-T C-A G-T T-A   T-A  
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The 2 strands of the DBNA molecule are   antiparallel  
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The specific point on the DNA molecule where replication begins is the   origin of replication  
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Early in the process of DNA replication, the enzyme________ separates the 2 strands   helicase  
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DNA polymerase   requires a template for the synthesis of DNA can only add nucleotides in a certain direction  
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If an organism lost the ability to make primase, what would it be unable to do?   add a short sequence of complementary RNA to the existing DNA strand  
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Two different mechanisms for copying the DNA strands are used because   the strands are oriented in opposite directions  
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On one of the strands of bacterial DNA, the new complementary strand is synthesized discontinuously into small pieces of DNA called   Okazaki fragments  
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One bacterial chromosome replicates to become 2 chromosomes with   each made of one strand of DNA from the original chromosome and one newly synthesized strand  
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A segment of DNA encoding a protein or an RNA molecule is a   gene  
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A __________ is the physical expression of the genes present and can change depending upon what genes are turned "on"   phenotype  
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Which nitrogenous base is NOT present in RNA   Thymine  
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Both DNA and RNA are usually double stranded molecules   FALSE  
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The process of synthesizing RNA from a DNA template is _____   transcription  
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The initial transfer RNA occupies the _____ on the ribosome   P site  
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_________ are groups of 3 bases in mRNA that specify one amino acid in the amino acid chain   Codons  
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If the codon GGU is positioned in the A site of the ribosome, what will occur?   a tRNA with the anticodon CCA will deliver its amino acid to the site  
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What usually terminates the process of translation   presence of a stop codon on mRNA  
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The bond connecting amino acids is a _________ bond   peptide  
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If you know the sequence of nucleotides in mRNA, you can deduce the DNA sequence it was transcribed from   True  
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What depicts the direction genetic info flows?   DNA--->RNA--->protein  
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Protein synthesis occurs on   ribosomes  
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Replication, transcription and translation take place in the bacterial cytoplasm   True  
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RNA is a chain of   nucleotides  
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What three components make up RNA structure?   phosphate, nitrogenous base, ribose sugar  
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What component of RNA is different from one individual or one bacterium to the next?   order of nitrogenous bases  
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The purpose of RNA synthesis is to provide a new copy of DNA as the original strand deteriorates over time   False  
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Transcription begins when RNA polymerase binds to __________   promoter on DNA  
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If one strand of DNA contains the bases ACAGT, what would be the complementary bases on the mRNA strand   UGUCA  
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Synthesis of mRNA is   in the 5' to 3' direction with new nucleotides being added to the 3' end of mRNA molecule  
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What happens when a hairpin loop forms in mRNA?   the RNA polymerase and the mRNA dissociate from the DNA  
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The process of transcription is similar to   the synthesis of the leading strand during DNA replication  
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After mRNA is made, what generally occurs?   the mRNA is translated to protein  
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Unlike DNA, RNA is usually single-stranded.   True  
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The classic transformation experiment done by Griffith used   harmless and virulent strains of Streptococcus pneumoniae  
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Transformation is a form of recombination. Recombination is__________   one bacterium donating DNA to another  
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In addition to transformation, the other 2 forms of horizontal gene transfer or recombination are   conjugation and transduction  
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In the beginning of transformation ________ binds to the target cell   double stranded DNA  
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During the entry of the donor DNA into the recipient cell   one strand is broken down by nucleases  
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The donor DNA   pairs with a homologous region o the recipient DNA  
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Mismatch repair is activated by   any difference between nucleotide sequence in the donor and recipient DNAs  
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As a result of mismatch repair during transformation   cells may have either original DNA or donor DNA in them  
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During the process of transformation in the lab setting, cells are plated on selective media to   make sure that only transformants grow  
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Cells that are capable of bringing DNA from their environment in through their cell wall are called   competent  
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Transformation is facilitated by   proteins on the cell wall that bind DNA from the environment  
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Central Dogma (newer version)   While information primarily flows from DNA to RNA to protein, some info from RNA flows back to DNA in a regulatory role  
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An operon is composed of ________   DNA  
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All structural genes in an operon code for proteins related to the same function   TRUE  
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Which part(s) of an operon will eventually be translated to protein?   Structural genes  
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If lactose is present, the operator of the lac operon is switched ____________ therefore, this is an example of a(n) ______operon.   on, inducible  
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Of all infectious agents, which group has the most variety of drugs designed to treat infections?   Bacteria  
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Antibiotics would be effective against which of these infections?   Cholera genital warts whooping cough syphillis  
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Why do antiviral medications often have side effects?   Viruses are intracellular pathogens, and therefore there is often host cell damage with antiviral treatments.  
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Rather than developing more antiviral medications, what is a more common focus for researchers when it comes to viral diseases?   vaccine development  
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virus size large to small   E. coli streptococcus Rickettsia Mimivirus Rabies Adenovirus Yellow fever  
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multiplication cycle of RNA animal viruses   Adsorption penetration-virus engulfed into vesicle uncoating-viral envelope is shedded synthesis assembly release  
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unique characteristics of viruses   -while viruses are not considered living, they cannot direct own multiplication but can direct the behavior of living cells -have a nucleic acid genome, can be RNA or DNA, SS or DS -species-specific and infect cells from all 5 kingdoms  
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During replication of the positive sense strand of lytic RNA phage, in order to make more positive   -the + RNA strand must code for the synthesis of RNA polymerase -RNA replicase uses the + sense RNA as a template to make -strand RNA -the - sense strand RNA is used to make more + strands  
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The negative sense strand of RNA is_____   used to synthesize more + strands  
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A positive sense strand lytic RNA phage attaches to the cell wall of an E. coli bacterium   False  
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Phage induced lysozyme lyses the host cell releasing the newly made phage   True  
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A positive strand of RNA   can directly act as mRNA  
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Steps to the lytic cycle   adsorption penetration synthesis assembly Lysis  
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How are temperate phages replicated?   The phage is replicated along the host cell's genome  
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An infection in animals similar to a lysogeny in bacteria is called a ___________ infection.   persistent  
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The activation of a prophage to enter the lytic cycle is called _________.   induction  
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Both lytic and lysogenic cycles eventually lead to bacterial host cell damage   True  
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How does lysogeny affect humans   Bacteria can become virulent due to phage genes, causing greater damage to infected human host  
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Possible configurations of viral nucleic acids   single stranded DNA Double stranded DNA-linear double stranded DNA-circular  
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Microbial control methods-Physical   heat and radiation  
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microbial control methods-mechanical   filtration  
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microbial control methods-chemical   surfactants halogens- ex: chlorine ---> which is sporicidal H2O2---> high activity-sporicidal phenolics--->ex: carbolic acid alcohols heavy metals-->ex: silver---> which is oligodynamic-sm amounts  
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halogens   Chlorine Iodine- ex: betadine, penetrates cells and interferes w/protein synthesis, can also be extremely irritating to the skin and toxic when absorbed  
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Hydrogen peroxide   -3% solution is used as an antiseptic for skin and wound cleansing -can be sporicidal in high concentrations -highly toxic to cells because of free radical formation  
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ethylene oxide   used to disinfect delicate instruments and plastic materials  
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Phenolics   Triclosan is a member of this antimicrobial category  
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Chlorhexidine   -used in hand scrubs, prepping skin for surgery -targets cellular membranes and denatures proteins -popular hospital agent due to low toxicity and rapid action -limited variable effects on fungi and viruses  
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aldehydes   VERY TOXIC, but used to disinfect surgical instruments  
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alcohol   -a 70% solution is best for denaturing microbial proteins -evaporates quickly which lowers effectiveness -ex: ethyl and isopropyl -dissolves membrane lipids and decreases surface tension  
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detergents   disrupt cell membranes but only rated for low level disinfection  
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heavy metals   mercury and silver  
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The effectiveness of a particular microbial agent is governed by several factors besides _____   time  
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The _______ of microbes affects the action of an agent, as does _______ of the population.   Number composition  
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The ________ as well as the ______ level of the environment will also influence the action of microcidal agents   temperature pH  
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The __________ of the agent as well as the _______________ against microbes also play a role in its ability inactivate microbes   concentration mode of action  
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the presence of ________ matter, such as saliva and blood also inhibits the action of many microbicidal agents   organic  
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relative resistance of different microbial types from more to less   Protons bacterial endospores mycobacterium staphylococcus and pseudomonas protozoan cysts protozoan trophozoites most gram - bacteria fungi and fungal spores non enveloped viruses most gram + bacteris enveloped viruses  
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The use of radiation as a microbial control mechanism   -use of rad. to control microbial growth comes in 2 form ionizing and nonionizing. ionizing is most destructive -nonionizing rad, ex UV light causes electrons to mk a quantum leap to orbital w/ higher energy state, cause thymine dimers to form, no ions  
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destruction of ALL microbial life   Sterilization  
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destruction of most microbial life on inanimate surfaces   disinfection  
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destruction of most microbial life on living tissue   antisepsis  
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mechanical removal of most microbes from living or inanimate surfaces   decontamination  
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A chemical labeled as bactericidal will kill bacteria where as a chemical labeled as bacteriostatic will inhibit bacterial growth but will not kill them   true  
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Conjugation   donor-living cell w/f factor recipient- living F-cell direct 2 cells transfer DNA through hollow appendages  
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transformation   donor- Lysed cell recipient- living competent cell indirect naked DNA is taken up through cell boundary  
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transduction   donor-dead cell lysed by phage recipient-living cell infected with phage indirect but with a vector Bacteriophage transfers DNA between host cells  
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agents that will kill a microbial pathogen or completely inactivate its ability to cause disease   virucide germicide sporicide  
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betadine belongs to what group of chemical control agents   halogens  
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major cellular target of chemical antiseptics and disinfectants   cell wall synthesis of proteins and nucleic acids cytoplasmic membrane cytoskeleton is NOT  
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sterile saline has sterilizing effects on the skin   false  
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DRY heat control of microbes   more time is required -incineration ---> temps can reach 6000 degrees C -oven----> sterilization takes 4 hours  
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MOIST heat control of microbes   less time required -non-pressured steam -boiling water---> disinfection---baby bottles and food -pasteurization--->beverages----71.6 C for 15 seconds -steam under pressure--->15 psi--- sterilizes on least time  
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Salting of meat prior to the development of refrigeration technology was an example of using osmotic pressure to control microbial spoilage of this food product   true  
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mechanism of drug resistance   drug inactivation--> drug is changed decreased permeability--> drug can't ding its target drug pumps---> drug enters but doesn't stay alternate metabolic pathway---> drug binds correctly  
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Inhibition of virus entry   no infection  
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Inhibition of nucleic acid synthesis   no viral DNA synthesis no reverse transcription  
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Inhibition of viral assembly/release   no virions leave host cell  
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The goal of antimicrobial therapy is to deliver a drug that will destroy the _______ without harming the _______   pathogen host  
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An ideal antimicrobial drug is _________ rather than ____________ and is relatively soluble.   microbicidal microbiostatic  
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An ideal drug remains potent long enough to act, but does not lead to the development of ____________ in microbial populations.   antimicrobial resistance  
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An effective drug assists the host's ______ and should not cause ______ or other infections.   defenses allergies  
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An ideal drug should be readily delivered to the site of _________ in the host and overall the drug should be reasonably ________.   infection priced  
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methods of antimicrobial susceptibility testing that can be used to determine minimal inhibitory concentration (MIC)   Etest Tube dilution test  
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Antibiotics other than Beta-lactam drugs, that also inhibit bacterial cell wall synthesis   vancomycin Isoniazid Bacitracin  
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Viruses are able to multiply inside a non-living cell   False  
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Individual viral particles have only one type of nucleic acid   True  
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Cells that lack compatible virus receptors are resistant to infection by that virus   True  
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What is the function of the reverse transcriptase enzyme   synthesizes DNA from RNA  
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superinfection   occurs due to the overgrowth of other potentially pathogenic microbes during or after initial antimicrobial therapy  
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drugs that are designed against which target are likely to have the least selectivetoxicity   cell membrane  
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antimicrobial that has the broadest spectrum of activity   tetracycline  
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your microbiome is most susceptible to changes when taking a _______ spectrum antimicrobial   broad  
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Which microbial group is the easiest to selectively target with antimicrobials   bacteria  
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BAsed on Kirby Bauer testing, a microbe is susceptible to antibiotic X and Y. X has Therapeutic Index 10 and Y Index of 3. Which would be the best choice based on the info given?   Antibiotic X  
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Bacteria have as much genetic information as Eukaryotes   False  
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PLasmids are necessary for the metabolism of bacteria   False  
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What are the main types of plasmids? Why are they medically relevant?   F plasmids transferred through F pilus R plasmid for resistance important for antibiotic resistance  
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DNA replication in prokaryotes is bidirectional, whereas in eukaryotes it is not   True  
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Bacteria have _____ origin of DNA replication, whereas eukaryotes have ________   1 multiple (bubbles)  
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What enzyme uses complimentary binding to replicate DNA? RNA?   Polymerase  
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Making mRNA from DNA template is called _________ whereas using tRNA, and ribosomes to make mRNA into a chain of amino acids is called _______   transcription translation  
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Prokaryotic mRNA is _________, meaning that many genes are transcribed and translated at once.   polycistronic  
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Bacteria utilize alternative splicing in their cells to create alternative versions of proteins.   False  
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Every species on earth essentially uses the same genetic code for codon ----> amino acid pairing   True  
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Bacterial transcription and translation is more efficient than in eukaryotes   Don't want interruption of our cells  
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Antibiotics that interrupt bacterial protein synthesis can also affect eukaryotic cells   False, can make multiple transcriptions  
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What are the three important features of an operon?   promoter operator structural genes  
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What event triggers induction of the lac operon?   lactose  
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The presence of tryptophan represses the trp operon   True  
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Describe the difference between an inducible and a repressible operon   inducible is turned on repressible is turned off  
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What is the difference between positive and negative regulation?   positive is controlled by an activation and negative is controlled by a repressor  
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What are the three ways that bacteria horizontally share genes?   Bacterial transformation bacterial transduction bacterial conjugation  
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What is the difference between F factor transfer and Hfr transfer?   F-pilus complete genome oilus Hf is interrupted before DNA transfer  
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A cell must be ________ in order to be transformed.   competent  
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A bacterium is considered a recombinant if it has new genes, even if they aren't expressed   False  
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__________ are involved in transduction.   Bacterial phages  
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___________ transduction involved the transfer of one specific gene, not a random one.   specialized  
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What is a pathogenecity island?   stretch of genes that pass on to be pathogenic  
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A spontaneous mutation arises from exposure to chemicals or physical agents   True  
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A ______________ mutation results in a stop codon and a nonfunctional protein.   nonsense  
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Mutations are always harmful to organisms   False  
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Mutations, once they happen are permanent   True  
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On an evolutionary scale, why are mutations and genetic diversity important?   mutations are changes to an organism's DNA and are important driver of diversity in populations mutation has introduce a new allele into the population that increase genetic variation and may be passed on to the next generation  
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Viruses can be seen with a light microscope   False  
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Viruses are alive   False  
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Viruses have no internal ______________, and are instead simply infectious particles that contain, at minimum, __________ and ______   metabolic process nucleic acid proteins  
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Viral infections are more common than bacterial infections   True  
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Viral mutation rates are low and viruses are easy to track in a population   False  
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Viral capsids are constructed from ________ subunits   capsomers  
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What shapes do capsids come in?   complex helical isocahedral  
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List 3 forms of viral nucleic acid   dsDNA ssRNA ssDNA  
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What is an envelope?   surrounds the capsid and is part of the membrane  
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Standard virus classification systems use the following:   genetic makeup structure disease caused  
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A virus name ending in -viridae denotes a viral   family  
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List and describe the main steps of animal virus replication   adsorption penetration uncoding synthesis assembly release  
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What is the difference between DNA virus replication and RNA virus replication?   RNA is in cytoplasm and DNA has to be transcribed  
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Viruses that infect animal cells can never infect human cells   False  
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Describe the main difference between the lytic and lysogenic phase of viral replication   Lytic destroys cell Lysogenic stays dormant and can be turned on to the lytic stage  
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The term plaques is only used to describe the effects of bacteriophage on cell cultures   False-all viruses produce plaques  
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What is a prion?   -common feature of spongiform encephalopathies -distinct protein fibrils deposited in brain tissue of affected animals  
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____________ is disinfection on a living surface   antisepsis  
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Which should be more "harsh" or work better: antisepsis or sanitization?   antisepsis  
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order of most resistant to least resistant   endospores mycobacteria protozoan cysts fungal spores gram + bacteria enveloped viruses  
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Describe the difference between a bactericidal agent and a bacteriostatic agent   bactericidal means killing of bacteria bacteriostatic means limiting the growth of bacteria  
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List and describe four factors that affect microbial death rate   number of bacteria population type of microbial growth temp and pH  
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What are the four cellular targets of physical and chemical agents   cell wall cell membrane cellular processes proteins  
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Lower temperatures can be used with dry heat than moist heat   False  
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The lowest temp required to kill all of the microbes in a sample in 10 minutes is the _________________   thermal death point  
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Cold merely retards the growth of most microbes.   True  
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Filtration is not a method of sterilization.   False  
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Ultraviolet radiation produces _______ dimers that affect growth by causing ________   pyrimidine absorption  
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Osmotic pressure achieves sterilization. T/F   False  
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Describe 4 desirable qualities of a germicide.   -rapid action in low concentration -solubility in water or alcohol and long term stability -penetration of inanimate surfaces to sustain a cumulative or persistent action -broad spectrum microbial action without toxicity to human and animal tissues  
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Describe 3 factors that affect the actions of a germicide   number of microbes how contaminated is it time of exposure  
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The most extensively used of all chlorine compounds is _________   Bleach  
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Phenol is still extensively used as a disinfectant   False  
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A higher concentration of alcohol is more effective than a lower concentration   True  
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List 2 acids used in food preservation   lactic acid ascorbic acid  
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Describe 4 characteristics of an ideal antimicrobial drug   not toxic to the host microbicidal not resistant potent long enough to effectively work and not broken down  
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The _________ test shows antimicrobial susceptibility using large agar plates, a bacterial lawn, and antibiotic-infused discs.   Kirby Bauer  
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Each species of bacteria has the same susceptibility to a particular drug   False  
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Identification of the species of bacteria in an infection is necessary to accurately determine antibiotic susceptibility.   True  
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An antibiotic with a therapeutic index of 4 is less toxic than one with a therapeutic index of 40   False  
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Microbial susceptibility is the only factor in choosing the right drug.   False  
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Describe some adverse reactions to antimicrobials.   allergic reaction diarrhea nausea/vomitting  
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The ____________ account for the greatest number of drug allergies.   Penicillin  
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Overgrowth of certain microbes due to antibiotic therapy that cause infection is known as __________.   Superinfection  
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The type of drug that inhibits cell wall synthesis is a _________ drug. Describe how it works.   Beta-Latam inhibition of cell wall synthesis and target the penicillin binding proteins  
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An antibiotic that acts on the bacterial cell wall will have little effect on a human cell.   True  
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Describe some ways that protein synthesis inhibitors might work   -incorrect amino acid insertion -block movement of RNA -attack one or both subcomponents of the 70s, 50s, or 30s ribosomes  
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An antibiotic that acts on the bacterial ribosome will have no effect on a human cell.   False  
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The least selectively toxic antibiotics are   ones that target the cell wall and folic acid synthesis  
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Antifungal and antihelminthic drugs can be toxic to human cells   True  
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What are some targets of antifungal?   membrane function tubal formation  
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Generally, how do anti-protozoan and anti-helminth drugs work?   inhibit function of the microtubules  
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There are as many antiviral drugs as there are antibiotics?   False  
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What are three ways can we target viruses?   barring penetration blocking transcription preventing maturation  
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What are some ways we can selectively target HIV replication?   reverse transcriptase  
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Bacteria can be resistant to antibiotics without ever encountering the drug   True  
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List and describe the 5 mechanisms of antibiotic resistance   -new enzymes are synthesized -permeability or uptake of the drug into a bacterium is decreased -drug is immediately eliminated -binding sites for drug are decreased in number -an affected metabolic pathway is shut down  
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What are the current drugs of last resort?    
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What is a superbug?   a strain of bacteria that has become resistant to antibiotic drugs  
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Many antibiotics prescribed to humans are for viral infections .   True  
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Nearly 80% of all antibiotics in the U.S. are given to ____________   livestock  
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___________ are a novel treatment that have been used to target specific bacteria and effectively treat bacterial infections.   Phages  
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