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Micro lab week 12
| Question | Answer |
|---|---|
| Microbial Diversity | Soil is a dense microbial habitat; just 1 gram of soil contains over 1 billion bacteria |
| Nitrogen gap | While nitrogen ($N_2$) is abundant in the atmosphere, plants and animals are incapable of fixing it from the air |
| Bacterial role | Certain soil bacteria have the unique ability to fix atmospheric nitrogen. |
| Symbiosis | This often occurs in a symbiotic relationship where plants provide carbon to the bacteria, and the bacteria provide nitrogen to the plant. |
| Energy Requirements | Nitrogen fixation is a complex biological process that requires a massive energy investment of 16 moles of ATP |
| Evolutionary advantage | Bacteria perform this high-energy task to eliminate competition. By evolving the ability to fix their own nitrogen, they gain access to vital nutrients that other microbes cannot use, ensuring their survival. |
| (+ N) Mannitol + Peptone | This medium contains peptone, which serves as a pre-existing nitrogen source. It allows for the growth of non-nitrogen fixers. |
| ( - N) Mannitol | This medium lacks a nitrogen source. Only bacteria that can fix their own nitrogen from the air ($N_2$) will grow on these plates. |
| Soil | primary source for isolating antibiotic-producing microorganisms due to natural bacterial competition. The testing process follows a three-day cycle |
| identifying antibiotic producers | Day 1: Inoculate a nutrient agar plate with a soil sample. Day 2: Use the streak plate method to isolate potential antibiotic-producing bacteria. Day 3: "Challenge" the isolated soil bacteria against known pathogens to see if they inhibit growth. Common Challenge Organisms: Escherichia coli (EC), Pseudomonas aeruginosa (PA), Staphylococcus aureus (SA), and Enterococcus faecalis (EF). |
| Inoculation method | Use cotton swabs and saline to collect soil samples, then streak the plate by rotating the swab |
| Incubation temperature | Soil plates are incubated at room temperature (~23°C) |
| Rationale | Unlike human pathogens, soil microbes are adapted to ambient environmental temperatures rather than the 37°C temperature of the human body. |