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Biology 2 - C01 - 04

🧬🧩BIO02 Module 1 — Composite MasterSet — 04

QuestionAnswer
What is genetic engineering? The deliberate modification of an organism’s DNA using biotechnology.
What is recombinant DNA technology? A method of combining DNA from different sources to create new genetic combinations.
What is a vector? A DNA carrier (often a plasmid or virus) used to deliver foreign genes into a host cell.
What is a plasmid? A small, circular DNA molecule used as a common cloning vector.
What is a transgenic organism? An organism that contains DNA from another species.
What do restriction enzymes do? They cut DNA at specific recognition sequences.
What are sticky ends? Single-stranded overhangs created by staggered restriction enzyme cuts.
What are blunt ends? Straight DNA cuts with no overhangs.
What does DNA ligase do? It seals DNA fragments by forming phosphodiester bonds.
What does reverse transcriptase do? It synthesizes complementary DNA (cDNA) from an mRNA template.
What is Step 1 of recombinant DNA technology? DNA isolation from donor and host organisms.
What is Step 2 of recombinant DNA technology? Cutting DNA with restriction enzymes to create compatible ends.
What is Step 3 of recombinant DNA technology? Ligation of foreign DNA into a vector.
What is Step 4 of recombinant DNA technology? Transformation of recombinant DNA into host cells.
What is Step 5 of recombinant DNA technology? Selection and screening of transformed cells.
What is transformation? The uptake of foreign DNA by a host cell.
What is heat-shock transformation? A method using temperature changes to make bacterial membranes permeable.
What is electroporation? Using electric pulses to open pores in cell membranes for DNA entry.
What is a selectable marker? A gene used to identify transformed cells, often antibiotic resistance.
What is blue-white screening? A method using lacZ disruption to distinguish recombinant from non-recombinant colonies.
What is gene therapy? The insertion of functional genes to treat genetic disorders.
What is CRISPR-Cas9? A gene-editing tool using guide RNA and Cas9 nuclease to cut DNA precisely.
What is a GMO? An organism whose genome has been altered using genetic engineering.
How is insulin produced using recombinant DNA? Human insulin gene is inserted into bacteria, which express the protein.
What is DNA fingerprinting? A technique using STRs to identify individuals.
What is biosafety level (BSL)? A classification of lab safety protocols based on organism risk.
What is bioethics? The study of ethical issues arising from biotechnology.
What is the Cartagena Protocol? An international agreement regulating the movement of GMOs.
What is gene drive? A genetic system that increases the likelihood of a gene being inherited.
What are off-target effects? Unintended DNA modifications caused by gene-editing tools.
What is biotechnology? The use of living systems or organisms and technology to develop products or processes for practical purposes.
What is cloning? Creating genetically identical copies of DNA, cells, or whole organisms; can occur naturally (identical twins) or be done artificially (e.g., somatic cell nuclear transfer) for research, agriculture, or therapeutic purposes.
What is DNA sequencing? Determining the exact order of nucleotides (A, T, C, G) in a DNA molecule to read genes or whole genomes, used in research, diagnostics, evolutionary studies, and forensics.
What is Polymerase Chain Reaction (PCR)? A method using repeated heating/cooling cycles and DNA polymerase to amplify a specific DNA fragment.
What is genome editing? Techniques (e.g., CRISPR) that make precise, targeted changes to an organism’s DNA sequence.
Define genetic engineering. The deliberate modification of an organism’s DNA using biotechnology.
What is a vector in recombinant DNA technology? A DNA carrier (often a plasmid or virus) used to deliver foreign genes into a host cell.
What are sticky ends? Single-stranded overhangs created by staggered restriction enzyme cuts.
Define transformation. The uptake of foreign DNA by a host cell.
What is reverse transcriptase used for? Converting mRNA into complementary DNA (cDNA).
Arrange the steps: Transformation, DNA isolation, Screening, Ligation, Restriction digestion. DNA isolation → Restriction digestion → Ligation → Transformation → Screening.
Why must restriction enzymes create compatible ends? To allow the foreign DNA and vector to base-pair correctly for ligation.
What is the role of DNA ligase? It seals DNA fragments by forming phosphodiester bonds.
Why is heat-shock used in bacterial transformation? The temperature change increases membrane permeability, allowing DNA entry.
Compare electroporation and heat-shock. Electroporation uses electric pulses; heat-shock uses temperature shifts.
How is recombinant DNA used to produce human insulin? The human insulin gene is inserted into bacterial plasmids; bacteria express the protein.
Why is blue-white screening useful? White colonies indicate successful insertion of foreign DNA; blue colonies do not.
Give one medical and one agricultural application of genetic engineering. Medical: gene therapy or insulin production. Agricultural: pest-resistant or herbicide-tolerant crops.
Why use cDNA instead of genomic DNA in cloning? cDNA lacks introns, making it expressible in bacteria.
How can CRISPR-Cas9 correct a mutation? gRNA guides Cas9 to the mutation site; Cas9 cuts; repair template fixes the sequence.
Restriction sites don’t match—give two solutions. Use different restriction enzymes OR add linkers/adaptors to create compatible ends.
Why are antibiotic resistance genes used as selectable markers? Only transformed cells survive on antibiotic plates, making identification easy.
How do off-target CRISPR effects pose risks? They may unintentionally cut other genes, causing mutations or harmful effects.
What do white colonies indicate in lacZ screening? The foreign DNA disrupted lacZ, meaning successful recombinant plasmids.
Why is recombinant DNA technology both powerful and ethically sensitive? It enables major advances but raises concerns about safety, equity, and unintended consequences.
Purpose of Recombinant DNA Technology The goal is to combine DNA from different sources to create new genetic combinations for research, medicine, or biotechnology.
Recognition Sequence (Restriction Enzymes) A short, specific DNA sequence (often palindromic) where a restriction enzyme cuts the DNA.
Viral Vector A virus modified to carry foreign DNA into host cells for gene delivery or expression.
Origin of Replication (Ori) A DNA sequence in a vector that allows it to replicate independently inside a host cell.
Selectable Marker A gene in a vector (e.g., antibiotic resistance) that allows identification of cells that successfully took up the vector.
Multiple Cloning Site (MCS) A short DNA region containing many restriction enzyme sites, allowing easy insertion of foreign DNA.
Reporter Gene A gene that produces a visible or measurable product (e.g., GFP, LacZ) to indicate successful gene expression or cloning.
PCR: Denaturation The step where DNA strands separate when heated to around 94–98°C.
PCR: Annealing The step where primers bind to target DNA at 50–65°C.
PCR: Extension The step where Taq polymerase synthesizes new DNA strands at around 72°C.
Role of Taq Polymerase A heat‑stable enzyme that builds new DNA strands during PCR.
Applications of PCR Used for DNA amplification, diagnostics, forensics, cloning, and detecting pathogens.
How DNA Separates in Gel Electrophoresis DNA fragments move through a gel toward the positive electrode; smaller fragments travel farther.
Role of Agarose in Electrophoresis Agarose forms a porous gel matrix that separates DNA fragments by size.
Interpreting Gel Bands Each band represents DNA fragments of a specific size; distance traveled indicates fragment length.
cDNA vs Genomic DNA (Difference) cDNA contains only expressed genes (no introns), while genomic DNA includes introns and non‑coding regions.
When cDNA Is Used Used when expressing eukaryotic genes in bacteria or studying gene expression.
Cloning Vector A vector designed to carry and replicate foreign DNA but not necessarily express it.
Expression Vector A vector that includes regulatory sequences to ensure the inserted gene is transcribed and translated into protein.
Role of Reverse Transcriptase An enzyme that converts mRNA into complementary DNA (cDNA).
Screening vs Selection Selection kills or inhibits non‑transformed cells; screening visually distinguishes colonies without killing them.
Example of Genetic Engineering: Bt Corn Corn engineered to express Bt toxin, giving resistance to insect pests.
Example of Genetic Engineering: Insulin Production Bacteria engineered with the human insulin gene to produce insulin for medical use.
 

 



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