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HIV and COVID
| Question | Answer |
|---|---|
| What cells do HIV tend to infect? | T helper cells |
| what does reverse transcriptase do? | reads RNA, makes complementary DNA which can then enter the cell |
| What protein contains the RNA genome? | capsid (p24) |
| 1 step of HIV cycle | gp120 protein on HIV needs to bind to two receptors: first CD4 on the surface of T helper cells, then to one of two receptors, which allows membranes to fuse |
| 2 step HIV | two membranes fuse, capsid enters cell with 3 viral enzymes |
| 3 step of HIV | Capsid rides along microtubules towards nucleus, viral DNA formed by reverse transcriptase (RNA dependent DNA polymerase) |
| 4 step of HIV | Viral DNA transported across nucleus and integrates into host DNA. Integrase integrates viral genome into host nuclear genome |
| 5 step of HIV | viral genes transcribed, exits nucleus, goes to ribosome for translation |
| 6 step HIV | newly formed viral RNA and proteins move to cell surface |
| 7 step HIV | Protease cuts large polyprotein into individual proteins, assembles mature virus |
| How to treat HIV (one way) | using a competitive inhibitor (fusion inhibitors, viral enzyme inhibitors) |
| How to treat HIV (second way) | combine 3 drugs at the same time, difficult for HIV to evolve resistant, take daily (HAART) |
| Cure strategies (one way) | shock and kill: wake up latent reservoir, shocking them so they start viral production and they can be targeted and killed off |
| cure strategies (second way) | CRISPR- T cells can be edited to be genetically resistant to HIV |
| COVID life cycle step 1 | spike protein on SARS-CoV-2 binds to ACE2 receptor in upper respiratory tract |
| 2 different ways of fusion | **depends on when the membranes fuse 1) spike protein must change structure so membranes can fuse 2) if spike protein doesn't change shape immediately, virus engulfed by membrane |
| translation 1 | make proteins required for transforming the ER and making RNA (proteases) |
| Life cycle step 3 | transform ER and make the RNA; viral RNA and mRNA produced |
| Translation 2 | structural proteins made at ER |
| final step COVID | viron assembly and release |