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Biochemistry CAC
| Term | Definition |
|---|---|
| Thiamine Pyrophosphate (TPP) location | Found tightly Bound to E1 |
| Thiamine Pyrophosphate (TPP) Function | Decarboxylates pyruvate, yields hydoethyl-TPP |
| Lipoic acid (lipoamide) location | Covalently bound to E2 via lysine "swinging arm" |
| Lipoic acid (lipoamide) function | Accepts hydroxyethyl carbanion from TPP ass acetyl group |
| Co enzyme A (CoA) function | Accepts acetyl group from lipoamide |
| Co enzyme A (CoA) location | Dissociable substrate for E2 |
| Flavin Adenine Dinucleotide (FAD) function | Accepts pair of electrons from reduced lipoamide |
| Flavin Adenine Dinucleotide (FAD) location | Tightly bound to E3 |
| Nicotinamide adenine dinucleotide (NAD+) location | Dissociable substate for E3 |
| Nicotinamide adenine dinucleotide (NAD+) function | Accepts a pair of electrons from reduced FADH2 |
| Three enzymes that are apart of the pyruvate dehydrogenase complex (PDH complex) | pyruvate dehydrogenase (E1), dihydrolipoamide transacetylase (E2), and dihydrolipoamide dehydrogenase (E3) |
| E1 | Pyruvate Dehydrogenase |
| E2 | Dihydrolipoamide transacetylase |
| E3 | Dihydrolipoamide Dehydrogenase |
| Thiamine pyrophosphate (TPP) is the coenzyme used | for all decarboxylations of α-keto acids, which require a cofactor to help stabilize the carbanion intermediate that develops during the reaction. |
| Thiamine pyrophosphate (TPP) vitamin | Vitamin B1 |
| Riboflavin vitamin | Vitamin B2 |
| Reaction of PDH step 1 | Decarboxylation of Pyruvate: E1 catalyzes the decarboxylation of pyruvate, forming hydroxyethyl-TPP. |
| Reaction of PDH step 2 | Transfer to Lipoamide: The hydroxyethyl group is transferred to a lipoamide moiety on E2, forming acetyl-dihydrolipoamide. |
| Reaction of PDH step 3 | Formation of Acetyl-CoA: E2 transfers the acetyl group to CoA, producing acetyl-CoA. |
| Reaction of PDH step 4 | Regeneration of Lipoamide: E3 reoxidizes dihydrolipoamide, transferring electrons to NAD+, forming NADH. |
| Niacin Vitamin | Vitamin B3 |
| Pantothenic Acid Vitamin | Vitamin B5 |